Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5269 |
Symbol | phaA |
ID | 7381389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | - |
Start bp | 267145 |
End bp | 270048 |
Gene Length | 2904 bp |
Protein Length | 967 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643648901 |
Product | putative monovalent cation/H+ antiporter subunit A |
Protein accession | YP_002547138 |
Protein GI | 222106347 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [COG2111] Multisubunit Na+/H+ antiporter, MnhB subunit |
TIGRFAM ID | [TIGR00940] Tmonovalent cation:proton antiporter [TIGR00943] monovalent cation:proton antiporter |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTGCTCGTTG TTCTCCTGCT TCTGCCTTTC GTCGGAAGTC TCTTATCTGT ATTTTTGCTG AATACGCCGT CTCGCCGCCT TCCGGCAGGC TCGGCCGCTA TTGTCATGCT CATTTCGCTG GCGCTGACGG CAAGTCTCTA TCCGGCGGTC GCCGATGGCG GCGTCGTAAG GTTCAACATG CCATGGCTAC CGCAGCTTGG TCTGGATTTT ACGCTGCGGA TGGATGGCCT GGCCTGGATC TTCACCATGC TGATCGCAGC CATCGGCTTT CTGGTCGTGC TCTATGCCCG TTATTATATG TCGGAAGAAG ATCCGGTTCC ACGGTTCTTC TCCTTCCTGC TCGCCTTCAT GGGCGCGATG CTTGGCATCG TGCTTTCGGG CAATGTCATC CTGCTGTCGG TCTTCTGGGA GCTGACAAGC ATCTTTTCAT TCCTGCTGAT CAGCTATTGG CATAATAATC CCAACGCGCG CGACGGTGCC CGAATGGCGC TGACCATTAC CGGGATCGGC GGCTTCTGCC TGTTGATCGG CCTTATTCTG CTCGGCAATA TCGTCGGCAG CTATGATCTC GACACCATTC TCGACTCCGG CAATGTCATT CGCGAACATT CCCTTTATGT CCCCGCCCTG GTGTTCATAT TGCTTGGCGC ACTGACGAAA AGCGCGCAGT TTCCGTTTCA TTTCTGGCTA CCGAACGCCA TGGCCGCTCC AACCCCGGTT TCGGCCTTTC TCCATTCAGC GACCATGGTC AAAGCCGGGG TGTTTCTGCT GGTGCGGTTC TGGCCTGTGC TATCAGGCAC CGATGAATGG TTCTGGATTG TCGGAGCGGC TGGGATCACA ACCTTGTTGC TCGGCGCCTA TTTTGCGATG TTCCAGCAGG ATCTCAAAGG GCTGCTGGCC TATTCGACTA TCAGTCATCT CGGACTGATC ACAACATTGC TCAGCCTGGG AAGTCCATTG GCAACGGTGG CGGCGATTTT CCACATGCTG AACCATGCGA CCTTCAAGGC ATCGCTGTTC ATGGCAGCAG GGATTATCGA TCACGAGACC GGAACCCGCG ATATGCGACG GCTGAGCGGC CTGTTCCGGT TCATGCCGTT CACCGCAACG CTTGCCATCG TCGCCAGCGC CGCCATGGCT GGCGTTCCGC TTCTCAACGG CTTTCTGTCC AAGGAAATGT TCTTTGCCGA AGCCGTTGAA ACCCATGCGG ATTCGATCCT GGACACCATC CTGCCCTATG TCGCAACGCT TGCCAGTGCC TTCAGCGTCG CCTATTCGCT GCGGTTCATC CACACTGTGT TCTTTGGCCC GCCGCCTCAG GACTTGCCCG TTGCCCGTCC GCACGAGCCG CCGCGCTGGA TGCGGTTTCC CGTGGAGTTT CTTGTGCTGG CCTGCCTGAT TGTCGGCATC ATCCCGGCAA TCTCAATCGG TCCCTTTCTT CACGTCGCCG TCGTCAGTGT TCTCAGGGCC GATACGCCGG AATACAGTCT GGCAATCTGG CATGGCGTCA ATCTGCCATT GGTGATGAGC ATGATCGCCC TTGTCGGCGG CGGACTGATC TATTTCCTGT TGAAGGACTA TCTCGCCCGG TGCCACGATG GTCCGCCGTT TTTTCACAAG TTCAAAGGCC AGCGTATTTT CGAGCGCGTT ATCGTTGAAG TGTCCTGGCA CTGGGCGCGT ATCGCCGAAC GTCGCCTCGG CACCCGCAAG CTACAGCCGC AACTTCGCTG GCTGGTGACA GTGGGTTTTG CGGCGGGCAT GCTGCCTCTT TATATCAGAG GCTTCGAGGT TCGCCCGCTT GTCTATTCCG GCGCCGATCC GGTGTTTGCA GCCCTTTGGG CCATCGGCAT CTGCCTTGCC ATCGGCACCG CCTATCTGGC GAAATACCAC CGTCTCGCAT CATTGGTGAT GCTCGGTGGC GTCGGTCTTA TCGTCTGCCT CACCTTCGTC TGGCTCTCGG CACCCGATCT GGCCATCACG CAATTGTTGG TCGAAATCGT CACCACAGTC CTCATCCTTC TCGGCCTGCG CTGGCTTCCC AAGCGATCCG AAGGACTTGG CGAAACAATG ACCTTGAGCG CGCGCTTTCG CCGGTTTCGG GATTTCGCTC TTGCAGTTCT TTGCGGGGTC GCCATGTCGT TCACCGCCTA TGCGGTGATG ACCATGCCGG TTCCCGATGC CATCGCCAGC TATTTCCTGG AAAACGCCTA TTCGCAGGGC GGTGGCCGCA ATGTGGTCAA TGTCATACTG GTGGATTTCC GTGGTTTCGA TACGCTGGGC GAGATTGCCG TTCTCGGGGT TGTCGCACTG ACAGTCTACG GGCTTTTGCG CCGCTTCCGC CCTGCCGAAG ACAGCATGGG CATGCCGGAA CAGCAGCAGG CGCAAAACCG CTTCGATGAG GAGCGGCCAG AGCGGTCAGC GGGCGATACG GTGCGCGATT ATCTTCTGAT CCCCTCGGTC ATCATGCAAT GGCTGTTTCC AGTTATCGTC ACGTTGTCGG TTTACCTGTT CATGCGTGGA CATGACCTGC CGGGCGGTGG TTTTTCTGCG GGGTTGACGC TGTCGATTGC GTTTCTGCTG CAATACCTGG CGGGTGGCAC GCGCTGGGCG GAAGATCGTA TCCGTATCCT GCCGCTGCGC TGGATGGGTA TTGGCCTGTT GACCGCCGTC GCCACTGGCA TCGGTGCCTG GTTGCTCGGA TATCCGTTCC TCACCTCGCA TTCCCGCTAT ATCGATCTGC CGTTGATCGG CAAGATCCCG GCGGCAACGG CGCTGCTATT TGATCTCGGC GTGTTCGCCC TGGTGGTCGG CTCCACGGTT CTTATTCTCG TCGCTCTCGC GCATCAGTCC TTGCGCATCA ATCGCCTGCG CATGATTGAT GCCTCGAAAT CGGAGGAAGG GTGA
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Protein sequence | MLVVLLLLPF VGSLLSVFLL NTPSRRLPAG SAAIVMLISL ALTASLYPAV ADGGVVRFNM PWLPQLGLDF TLRMDGLAWI FTMLIAAIGF LVVLYARYYM SEEDPVPRFF SFLLAFMGAM LGIVLSGNVI LLSVFWELTS IFSFLLISYW HNNPNARDGA RMALTITGIG GFCLLIGLIL LGNIVGSYDL DTILDSGNVI REHSLYVPAL VFILLGALTK SAQFPFHFWL PNAMAAPTPV SAFLHSATMV KAGVFLLVRF WPVLSGTDEW FWIVGAAGIT TLLLGAYFAM FQQDLKGLLA YSTISHLGLI TTLLSLGSPL ATVAAIFHML NHATFKASLF MAAGIIDHET GTRDMRRLSG LFRFMPFTAT LAIVASAAMA GVPLLNGFLS KEMFFAEAVE THADSILDTI LPYVATLASA FSVAYSLRFI HTVFFGPPPQ DLPVARPHEP PRWMRFPVEF LVLACLIVGI IPAISIGPFL HVAVVSVLRA DTPEYSLAIW HGVNLPLVMS MIALVGGGLI YFLLKDYLAR CHDGPPFFHK FKGQRIFERV IVEVSWHWAR IAERRLGTRK LQPQLRWLVT VGFAAGMLPL YIRGFEVRPL VYSGADPVFA ALWAIGICLA IGTAYLAKYH RLASLVMLGG VGLIVCLTFV WLSAPDLAIT QLLVEIVTTV LILLGLRWLP KRSEGLGETM TLSARFRRFR DFALAVLCGV AMSFTAYAVM TMPVPDAIAS YFLENAYSQG GGRNVVNVIL VDFRGFDTLG EIAVLGVVAL TVYGLLRRFR PAEDSMGMPE QQQAQNRFDE ERPERSAGDT VRDYLLIPSV IMQWLFPVIV TLSVYLFMRG HDLPGGGFSA GLTLSIAFLL QYLAGGTRWA EDRIRILPLR WMGIGLLTAV ATGIGAWLLG YPFLTSHSRY IDLPLIGKIP AATALLFDLG VFALVVGSTV LILVALAHQS LRINRLRMID ASKSEEG
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