| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5254 |
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| Symbol | |
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| ID | 7381375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 249414 |
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| End bp | 250526 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643648887 |
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| Product | ABC transporter nucleotide binding/ATPase protein (sugar) |
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| Protein accession | YP_002547124 |
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| Protein GI | 222106333 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAGA TCACTCTCGA TAATATCACC AAAAGCTGGG GCGAGACCCA GGTCCTGAAG
CCGATGAGCC TGACGATCGA GGATGGCGAA CTCGTCGCCA TTCTCGGGCC TTCCGGCTGC
GGAAAATCGA CCACGCTGTT TCTGCTCGCC GGTCTCTATG CGCCGACGTC TGGACAGATC
GGTTTCGACG GACACAATGT CAACCGCGTC GACGCGCGCG ACCGCAATGT CGGCATCGTC
TTTCAGTCCT ACGCGCTCTA TCCGAACTTG ACGGTGCGCG ACAATATCGC CTTTCCGCTT
CGCTTCAAAA CCATGCGCAA GGACGAGATT GCCCGACGTG TCGAAGAAGC AGCCAACCTG
GTGCAGATCA GCGCGCTGCT TGACCGCCGC CCCTCACAGC TTTCCGGCGG TCAGCAGCAG
CGTGTCGCCT TGGCGCGTGC GCTGGTGAAG GAGCCGAATA TCCTTTTGCT GGATGAACCG
CTTTCCAATC TTGACGCCAC CCTGCGCATC ACCATGCGGG CTGAGTTGAA AAGCATACAG
AAGCGGCTCG GTTTCACCAC GCTGATCGTC ACCCATGACC AGATCGAGGC GATCACCATG
GCCGACCGGA TCATCTGCAT GAACAATGGC GAGATCGCCC AGGTTGGTAC GCCGGATGAT
CTTTATCGGC GTCCGAGCAA TCTGTTCGTG GCAGGCTTTA TCGGCACGCC GCCGATGAAC
CTTCTCAAGG GACATGCCAC GGGGTTCAAA TTGCGTATCG GCGAGACATC CGTCGCCCTG
ACTGGAGAGC GTGAGGGAGA GGTGACGCTT GGCTTGCGAC CCGAAGACAT CACCCTTGTT
TCACACGCGG ATGCACCGCT CAGTGGGGAG ATTATCAGCG TGGAGCCGAT GGGTCGCGAA
GTGTTCTACA TGATCGACAC GCCCGCAGGC GTCATCCATG CGCTGGAATA TGGAGAAGCC
GTGCGCCATG CACCCGGCGC CAGGGTTGGC ATTGTCTGCA AGCCGGAACA CACGCTGTTG
TTCGACGCCT CCGGCAACCG CATTGTTGAT CTCTACGCCA AGCTTTTGCA ACATTCCGAT
AGGCTCGTGA AAACGTTAGA ACCAGCAAAC TGA
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| Protein sequence | MAKITLDNIT KSWGETQVLK PMSLTIEDGE LVAILGPSGC GKSTTLFLLA GLYAPTSGQI
GFDGHNVNRV DARDRNVGIV FQSYALYPNL TVRDNIAFPL RFKTMRKDEI ARRVEEAANL
VQISALLDRR PSQLSGGQQQ RVALARALVK EPNILLLDEP LSNLDATLRI TMRAELKSIQ
KRLGFTTLIV THDQIEAITM ADRIICMNNG EIAQVGTPDD LYRRPSNLFV AGFIGTPPMN
LLKGHATGFK LRIGETSVAL TGEREGEVTL GLRPEDITLV SHADAPLSGE IISVEPMGRE
VFYMIDTPAG VIHALEYGEA VRHAPGARVG IVCKPEHTLL FDASGNRIVD LYAKLLQHSD
RLVKTLEPAN
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