| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5250 |
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| Symbol | |
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| ID | 7381372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 245990 |
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| End bp | 247363 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643648884 |
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| Product | ABC transporter substrate binding protein (sugar) |
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| Protein accession | YP_002547121 |
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| Protein GI | 222106330 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2182] Maltose-binding periplasmic proteins/domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.467726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAAT GCCTCGCCCT TCTCGCCACC GTGGCGATTT CTGCGCTTGC CACCGGATGG
GCGCATGCAG AAGACATCAA GATCAAGCTT TCGACGCTTG CCGATAAGAC GGCTCCGGCG
CGCATCACCA ATATCGAAGC CGCCGCAGAC ATCATGAACA AGCAGTTCAA GGCGGCGGGC
GTCGATAAAC ATATTGTCAT CGAAGCCAAT AACAGCACCG TTAAAGGCTG GGACGACCTC
GCCCTCGATA CGCTGAAGGC ATTTGCAGTC GGTCAGGGGC CGGACATCTA TGTCGTGCCG
CATGAATGGA TCAGCAAATT CGCCGAGGAT GGCGATGCAC TGCCGATGGA CGAGCGGATT
GCCGCTGCCC CTTGGGTCTA TGGCGACATC CTGCCGGTGC TGTGGAAGGC CGCCAAGGGT
AATGATGGCA AGATTTACGG CATACCGCAG GATGCCGAGA TCCGTATGTT CTTCTATAAC
AAGGACATGC TGCGCAAGAT CGGCAAGGAT GAGGCCTTTA TCGAAGGCTT GCCCGCCAAG
GTCGAGGCTG GCGAATTCAC GCTTGATGAT CTGACGGCGC TCTCCAAGGA AGTGGTCGAT
GCCAAGGCTG CTCAATACGG CATGTTGCAT CGCCCCAATG TCGGCATCGA TTATCTGATG
GTCTTCCAGT CCTATGGCGT CAAATTCCTG GATGAGAAAA CCGGCAAGCT GGTGTTTCCG
AAAGCGGAAA TGACCAAGGC TCTCGGCTGG TACGAGCGCA ATGCCAAGCA AGGTGTTACC
CCTGTCGATA ACACAGCAAT GAGCTGGGAT GCGATCCAGG GCGCCTTCAA GCAGGAAAAG
GCATTCATCT TCCATCAAGG CGTCTGGGCG GTTGCCTGGC AGCTTGGCGA GATGAACGGT
GCCACCTGGC CGACGGATCG CGACGGCTAT TTCCACAAAA TCGGCTGGAT TCCGGCCCCG
GCTGCAGAAA AGGGCGGCAA GCCCGCCAAT CTTTCCCACC CGCTGCTTTA TACCGTCAAT
GCCAAGAGCA AGAATGCAGA GATTGCCGCT GATCTCGTAG CACTTGCGAC ATTGCCGTAT
TTCAACAACC AGCACGCGGT CACATCCTAC CATACAGCAA TCAGCAACGC TCAGACGGCA
ATGCCGAAAT ACAAGGACAA TTGGGTTCTG TCGGCGGCAT CGCCGATGAT GGCTCACGCT
GGGTTCGTGC CGAACCACAC CCAATTCGGC AGCTACAACA AGATTCTGTT CAGCGGCTTG
CAGGCCGTGG AAACCGGAAA GATGAAGGCG GCCGATGCCG TTGAGTTCAT TGCCGACGAA
TTTGAAACGC AATTCGGCTC GGACGTTGAA ATCCGCGATA CCGCCAGCAA CTAA
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| Protein sequence | MTKCLALLAT VAISALATGW AHAEDIKIKL STLADKTAPA RITNIEAAAD IMNKQFKAAG
VDKHIVIEAN NSTVKGWDDL ALDTLKAFAV GQGPDIYVVP HEWISKFAED GDALPMDERI
AAAPWVYGDI LPVLWKAAKG NDGKIYGIPQ DAEIRMFFYN KDMLRKIGKD EAFIEGLPAK
VEAGEFTLDD LTALSKEVVD AKAAQYGMLH RPNVGIDYLM VFQSYGVKFL DEKTGKLVFP
KAEMTKALGW YERNAKQGVT PVDNTAMSWD AIQGAFKQEK AFIFHQGVWA VAWQLGEMNG
ATWPTDRDGY FHKIGWIPAP AAEKGGKPAN LSHPLLYTVN AKSKNAEIAA DLVALATLPY
FNNQHAVTSY HTAISNAQTA MPKYKDNWVL SAASPMMAHA GFVPNHTQFG SYNKILFSGL
QAVETGKMKA ADAVEFIADE FETQFGSDVE IRDTASN
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