| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5240 |
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| Symbol | |
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| ID | 7381365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 238171 |
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| End bp | 239745 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643648877 |
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| Product | hypothetical protein |
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| Protein accession | YP_002547114 |
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| Protein GI | 222106323 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5267] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.091934 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAATT CCAACGATGT CGATGCCGCA TTGGCGCTCT GGCGCTTCGG CCTTGGCGCT
GCGGATGGCG GGATCACCGC TATCAAGGAT GCCCCCCGCG ATCTCTTAAA GGAAGAGATC
ACAGAGCGTG CTGTGCCAAC GCCCGTCGGC GCGCAATTGC GCTCCAGTTC CGATCTGCTG
GTGGCGCTTT ACGAATACCA AAAACAGGTT AAAGCCGAAC GCGACAAGCA ACCCGCAGCC
GGTGCCATGG CCGGCGCGGC CATGGCTGGC GCGAATGCGA TGCAAGGCGC AGGCGGCCCG
CCCCAAGCTG CCGGCATGCA AGGCAATGCT ATGCAGGGCA ATGGCATGCA GGTGGGTGCC
ATGCCGCCCC AGTCGCAACC CCAACCGCAG GCCCAAGCTC AGGCCCAGGC CCAACCCCAG
TCCATGGACA AAAAGCCGGA TATGCCGGTC TCCAAGCGTC CCTATTTTCC GCAGCAGATC
CTGCTTGCGG AGGCCGACGC CCGTTTCAAC GGCACGATCC ACCAACCGTT GATCGGCTTT
GGCGAACGGC TGGCGATGTT CTGGGCCAAC CATTTTTCGG TGGCGATCAG CAAGGGTGGC
GAAGTGCATA TTCTGGCTGG CGCCTTCGAG CGGGAGGCCA TCCGTCCCCA TGTCTTTGGG
AGGTTCGAAG ACATGCTGCT GGCGGTCGAA ACCCATCCGG CCATGCTGGT TTTCCTCGAT
AACCAGCAAT CGATCGGCCC GACCTCGCCC GCCAACAAGA ATGGCAAGCG CGGCCTGAAT
GAAAATCTTG CCCGCGAGAT CATGGAACTG CACACGCTCG GCGTTGATGG TGGCTATAGC
CAGGCAGATG TGACGTCGCT GGCGCGGATC ATTACCGGCT GGACATTCTA CCGCGATGAA
AAGCGCCCAG GCCCACAGGG CAAATTCATC TTTAACGCCA ATGCCCATGA ACCGGGCGAC
CACACGGTGA TGGGCATGAC CTATGCCGAG GGCAGTGTGG AACAGGGCCG CACCGCCTTG
CGCGATCTGG CTCGCCACCC GGCAACCGCC AGACATATAG CCACGAAACT TGTCCGGTAT
TTTGTCGCCG ACCAGCCGCC CCCGGCCCTG GTGACGAAAC TGGCTGCCGC CTATACCAAG
TCGCAGGGCG ATCTCTCGGC TGTCTACACT GCCCTTATCG ATGCCGACGA AGCCTGGAAC
CCGACGCTGA CGAAAATGCG CATGCCACAG GATTATGTGG CGGCGATGTT GCGCAGCAGC
GGGATCAGGC CGAAACCGGA GCAGATCATT TCCATGCTGA ACGCGCTTGG CCAACCGCTG
TGGAACCCCG CCGGACCCAA CGGTTTTTCC GACGTCACCG ATGCCTGGGC ATCGTCGGAA
TCTCTGGCGA CCCGCATCGA TGCGGCCAAC CTGTTTGCCC ATCAGATCCA GGGCCAGATC
GACCCCCGTT CCTTCGCTGG CGACCGGCTG GGACCGCTTC TCACCGCCGA TACATTGCAG
GCGATTTCCC GGGCCGAAAC CAGACCACAG GGCCTGTCGA TTGCTTTCCT TTCCCCCGAA
TTTCAGAGGC GCTGA
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| Protein sequence | MSNSNDVDAA LALWRFGLGA ADGGITAIKD APRDLLKEEI TERAVPTPVG AQLRSSSDLL
VALYEYQKQV KAERDKQPAA GAMAGAAMAG ANAMQGAGGP PQAAGMQGNA MQGNGMQVGA
MPPQSQPQPQ AQAQAQAQPQ SMDKKPDMPV SKRPYFPQQI LLAEADARFN GTIHQPLIGF
GERLAMFWAN HFSVAISKGG EVHILAGAFE REAIRPHVFG RFEDMLLAVE THPAMLVFLD
NQQSIGPTSP ANKNGKRGLN ENLAREIMEL HTLGVDGGYS QADVTSLARI ITGWTFYRDE
KRPGPQGKFI FNANAHEPGD HTVMGMTYAE GSVEQGRTAL RDLARHPATA RHIATKLVRY
FVADQPPPAL VTKLAAAYTK SQGDLSAVYT ALIDADEAWN PTLTKMRMPQ DYVAAMLRSS
GIRPKPEQII SMLNALGQPL WNPAGPNGFS DVTDAWASSE SLATRIDAAN LFAHQIQGQI
DPRSFAGDRL GPLLTADTLQ AISRAETRPQ GLSIAFLSPE FQRR
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