| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5234 |
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| Symbol | |
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| ID | 7381361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 234179 |
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| End bp | 235228 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643648873 |
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| Product | hypothetical protein |
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| Protein accession | YP_002547110 |
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| Protein GI | 222106319 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGAGA CCATGCTCGT CACGGGCGGG AGCGGATTTG TCGCCAGCCA TCTCATTCTT
CAACTTCTTG AAATGGATGC CACTGTGCAC ACCACGGTCA GAAGCCTGCG CAATGTGGCC
AAGATCAAGC CTTTGACCGA TATGCAGGCC CGCTTTCCGG GGAAGTTGAC GCTCTATGAG
GCCGACCTTC TGACCCCTGG TTCTTTCGAT GCCGCAATGG CTGGCTGCGC GATTGTTTTC
CACGTCGCAT CGCCTTTCAA GCTGCCGGAA AAAATCAAGG ATGGGCAGCG CGAAATGGTG
GAACCTGCCC TTCAAGGCAC CCGTAATGTT CTTGGCAGCG TCAACAGGAC TGAAAGTGTC
CGGCGCGTGG TGATGACATC GACGATTGGC GCGATTTTTG GCGATTATAT CGATATCCGG
TCGATGAAGA ATAACACGGT TGCCGAGGAC TATTTCAATA CGTCAAGCAA TGTTCAAAAC
AATCCATACC ATTATTCCAA GGTTCTGGCG GAAAAGGAAG CCTGGAAAAT CCAGGGTGAG
CAAAGCCGCT GGAGCCTGAC AACCATCAAT CCAGGCATGA TCCTCGGCCC TTCCTTGACG
CCTGCTTCTG AATCCGGCTC GCTTTTTCTG CTGGACGAGA TGTTCAAGGG ATATTTTTTC
TACGGCATGC CGGACCTCAG TCTCGCATGT GTGGATGTTC GCGACGTGGC GCAGGCGCAT
ATCCGGGCGG CGCTGAATCC GGACGCAAAG GGGCGTTATA TTCTCGCGGA AAACCGCACC
CGGACCTTCC TGGAAATCGC CGGTTACGCA CGCCGGGTTC ACCCCAAGCC CTATCTGTTG
CCCTCCTGGC AGATTCCCAA TCTGGTGGTT CGGCTGATCG GGCCGCTGTT TGGCCTGACG
CAGGCATATA TGACGAACCA TCTCGGCATT CGCTTTGCTC TGGATAACAG GCGCAGCCAG
TCTGAGTTGG GCATCGCCTA CCGGCCATTC GAGCAGACGA TGGCGGATCA TTATCGCGGT
TGGGCGCAAC AGCGTCGCGC GACTGCGTAA
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| Protein sequence | MQETMLVTGG SGFVASHLIL QLLEMDATVH TTVRSLRNVA KIKPLTDMQA RFPGKLTLYE
ADLLTPGSFD AAMAGCAIVF HVASPFKLPE KIKDGQREMV EPALQGTRNV LGSVNRTESV
RRVVMTSTIG AIFGDYIDIR SMKNNTVAED YFNTSSNVQN NPYHYSKVLA EKEAWKIQGE
QSRWSLTTIN PGMILGPSLT PASESGSLFL LDEMFKGYFF YGMPDLSLAC VDVRDVAQAH
IRAALNPDAK GRYILAENRT RTFLEIAGYA RRVHPKPYLL PSWQIPNLVV RLIGPLFGLT
QAYMTNHLGI RFALDNRRSQ SELGIAYRPF EQTMADHYRG WAQQRRATA
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