Gene Avi_5226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_5226 
Symbol 
ID7381354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011988 
Strand
Start bp225377 
End bp226816 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content56% 
IMG OID643648866 
Productaldehyde dehydrogenase 
Protein accessionYP_002547103 
Protein GI222106312 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTCGATA TGGCCATTGA AACTCTCCAG TCTATTCTGG AACGCCAGCG ACAATCCTTC 
CAGCATGACA GTTATCCGTC ACTGTCCTTG CGTCGGGACC GCCTGAACCG GATCGGCCGA
TTGCTGAAGG AGAACCGGCA AGCGCTGTGC GATGTGGTTT CTCGGGATTT TGGTCATAGA
TCCGATCATG AAACGGTGCA ATTGGAGATT GCTCCGCTCA TGAGCGCGCT TCGCCATACA
CGGTCTCATC TACGCCGATG GATGAAACGC GAACGCCGTG GACGCTCGAT TGAGTTTCTG
CAGCTTGCAA ATTGGGTCCA ATACCAGCCG CTCGGGGTGA TTGGTATTAT GGTGCCGTGG
AACTATCCGC TTCTACTGGC ACTCGGACCG CTGATTGACA TTTTGGCTGC GGGAAACCGG
GCGATCATCA AACCGTCGGA ATTGCTGCCG GAAACCTCGG CTCTTCTTTC AAAGCTCGTC
GAGGCTTATT TCTCCCCGGA GGAGGTTGCC GTTATCGAAG GAGGGGTGGA GATTGCCGCA
GCCTTTTCTG CCCTGCCGTT CGATCATCTG ATTTTCACCG GCTCAACGGC AGTCGGTCGC
AAGGTTATGG CGTCAGCAGC TGCTAACCTG ACACCGCTCA CCCTGGAACT GGGTGGCAAG
TCGCCCGCAC TCATCGCCCC GGATTATCCC ATTGCCGATG CAGCCCGTGA CATCGCCTTT
GGAAAGCTGA TGAACGCGGG CCAGACTTGC ATTGCACCTG ACTATGTTCT GGTCGAGAAA
TCAAAACTTG GAGACCTTGC ATCCGCCCTG ATCTCTCAGG CAGAGGCTTT TTATCCACGA
CAGGCGGGAC CACAACATGC GGGGCCACAA CACGCAGGGC AAGAACAGTA TTCAAGCCTT
GTCGGCGCTC GAGCGCATGA ACGGTTGCTG AAAGGCATTG AGGAATGCCG CGCCCGTGGG
GCCAAACTCA TCACTGCTGA TATCGCCATG CCCTCTCAAG GACACGTGAT CGCACCCACG
CTGGTAATCG ACCCGCCTGC GGACTGCTTG CTGATGGAGG AAGAAATCTT CGGGCCAATC
CTGCCCCTTA TTCCCTATGA GGATTTTGAC ACAGCGTTGA AATTTGTCCG CGAGCGCCCG
CGCCCTCTGG CGCTCTATAT CTTCACGGGA AACCGGGCGA CCGAGAAAAA AGCACTGTCG
AACACGATTT CCGGCAATGT CACTATCAAC GGTACCCTTC TGCATATCGC TCAAAACGAC
CTGCCCTTTG GCGGTATCGG GCCAAGCGGC ATGGGGGCCT ATCATGGTCA TGAGGGCTTC
AAGCGTTTTT CGCACGCCCG CGGCATTGCG AAAGTCCGTC TTTTCAATCC CGCACGCCTC
GCCATGCCTC CTTACGGATG GCTGGCACAA GTTCTGGCCA GGTTTATGAT GCGTGACTAA
 
Protein sequence
MFDMAIETLQ SILERQRQSF QHDSYPSLSL RRDRLNRIGR LLKENRQALC DVVSRDFGHR 
SDHETVQLEI APLMSALRHT RSHLRRWMKR ERRGRSIEFL QLANWVQYQP LGVIGIMVPW
NYPLLLALGP LIDILAAGNR AIIKPSELLP ETSALLSKLV EAYFSPEEVA VIEGGVEIAA
AFSALPFDHL IFTGSTAVGR KVMASAAANL TPLTLELGGK SPALIAPDYP IADAARDIAF
GKLMNAGQTC IAPDYVLVEK SKLGDLASAL ISQAEAFYPR QAGPQHAGPQ HAGQEQYSSL
VGARAHERLL KGIEECRARG AKLITADIAM PSQGHVIAPT LVIDPPADCL LMEEEIFGPI
LPLIPYEDFD TALKFVRERP RPLALYIFTG NRATEKKALS NTISGNVTIN GTLLHIAQND
LPFGGIGPSG MGAYHGHEGF KRFSHARGIA KVRLFNPARL AMPPYGWLAQ VLARFMMRD