| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5219 |
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| Symbol | |
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| ID | 7381348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 217671 |
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| End bp | 218972 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643648860 |
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| Product | oxidoreductase |
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| Protein accession | YP_002547097 |
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| Protein GI | 222106306 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.1846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCCGC TGTTGCGCAA ACATGCGGCT GAGAGCGAAC AGCTCGGCGC GCTTGCGCCA
GCGACGCTAG CGGCCGTCGA TCGCTCTGGT GCCTTCAAGA TCACCATCCC GGTCGAGCTT
GGAGGCTATG CACTGGGCGC ACGCGATGCT GCGGAAATCG TCAAAGCGCT CGGCCAGGGC
GATGCTTCCG CCGGTTGGCT GGTGATCGTC TCGAGCGCAG CCAGAAACGC TCTGGGCTTC
GATCCAAAGG CTCGCGACGA AGTCTTCGCC GGCATCCAGG ACTGGGTTGG GCCAATCATG
TTTGGTGCCA CCGTCTTTGC GCCAAAGGTT GGCGATGGCC GCAAGGTCGA CGGAGGCTAC
ATGGTGAAGG GCAAATGGTC CTTCGGCAGT GGTTGCAAAC ATGCTGCCTG GGGAGCAGTC
GGTTTCGAAT ATGACGACCC GGCAAGCGGC GCACGGTTGC GCGCCATGGG TATCCTGTCA
CGCGATCAAT ATGAAATCGT CGATGACTGG CATGTGATGG GCCTGCAAGC GACAAATTCA
AACAGCGTCC GGGCCGACCA GGAGATTTTT GTTCCCGACT ACCGCGTCGT ACACACCAAT
GACCTGCCGC GGATAATGGA CTCATTGAAG GGCAAATATT CTGGACTGGC TTTCAAGCAC
AGCCCGATTG GCGGTATGGT CGCCATGACA TGCACCTTTG CGGCCCTTGC AGTCGGTATC
GCGCAAGGCG CCCTCGACTC TTTCCTCGAA CAGGCAAAGA AGCGACCGCC CTTCAACCTT
CCCTATAAGA CGATGTCGGA AATGGCCTCG ATCCAAATGG TTGCCGGTAA AGCGCGGGCC
GTCATCAATG GGGCGAACGC CGTGCTCTGG CGCCACGCCG ACGAAATCGA CCGGCGTGCG
ATTGCAGGTG AAGACTTCTT CCCCTGGAAC GAACCCGAGA TCACCATGGA CCTCGTCCAC
CAGATCCACG AATGCCTGCG CGTGGTCGAT GGCCTCTTGC TTGCACTTGG GTCTTCGGCT
GTCGTCCTCA GCAATCCGTT GCAACGCGCC TTGCGCGATA TCCATGTGCT GGCGACGCAT
GGTGCCTTCC GGATCGATCC AATGGCAGAA ATCAACGGAC GCGACATGTT CGGTCTCGAA
CCTTTCCCGA TGATTGCCGC CCTGAGTTCA CCTCCTCCGG GCTCACCTCC TGCTGGTAAG
GGTCCATCGC ATATGCCTCC TCCGGGCATG ACACCTCCAG CAGGCATGGC CCCACCACCA
GGTATGGCGC CCCCACCAGG TATGACACCC GTGCGAGGTT AA
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| Protein sequence | MLPLLRKHAA ESEQLGALAP ATLAAVDRSG AFKITIPVEL GGYALGARDA AEIVKALGQG
DASAGWLVIV SSAARNALGF DPKARDEVFA GIQDWVGPIM FGATVFAPKV GDGRKVDGGY
MVKGKWSFGS GCKHAAWGAV GFEYDDPASG ARLRAMGILS RDQYEIVDDW HVMGLQATNS
NSVRADQEIF VPDYRVVHTN DLPRIMDSLK GKYSGLAFKH SPIGGMVAMT CTFAALAVGI
AQGALDSFLE QAKKRPPFNL PYKTMSEMAS IQMVAGKARA VINGANAVLW RHADEIDRRA
IAGEDFFPWN EPEITMDLVH QIHECLRVVD GLLLALGSSA VVLSNPLQRA LRDIHVLATH
GAFRIDPMAE INGRDMFGLE PFPMIAALSS PPPGSPPAGK GPSHMPPPGM TPPAGMAPPP
GMAPPPGMTP VRG
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