| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5215 |
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| Symbol | |
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| ID | 7381344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 212692 |
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| End bp | 213627 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643648856 |
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| Product | AraC-type DNA-binding domain-containing protein |
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| Protein accession | YP_002547093 |
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| Protein GI | 222106302 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.329333 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGTCT GGAACGCGAA CGAAATGCCG GAACGGGACC GCTTTCCCTA TTGGAGGGAG
GTTCTGTGCG AAGCCTATAT TGCCCTCAAT CCCATTCTTG AGGGCGAGCA GCGCTTCAAG
GGAGAGGTTA AGGCCAATCT GCTCGATTGC ATCAACGTGA CAACCATTTC GTCAAGCCGG
CAGAAGATAC ATCGCAGACG TCTGGATATC AGCCGTATGC CGCACGAAGT CTACTTCCTC
AATCTTCAGG TAAAGGGACA GTGCCGGATG ATGCAAGGAT CGCGGGAAGC GCTGCTGGAG
CCGGGTGATT TTTCGCTTGT GGATTCAACC GAGCCTTATC TCAACGATTA CTGTAGCGAT
GACTGGACCC AATATTCCTT CCGCATCCCG CGAGCCATGC TGAAACCATT GCTGAAACAG
GCAGACAAGC AAACGGCAAT CCGCTTTACC AGTGCGCATC CCATAGCGTC CGTTGCCATC
GACTATCTGA AATCCGTCGC GCAGAATGCG GAACACATCG GGACTGCCTC GACGCCGATT
GCAAATCACA TCGTCGATCT CGTCGCCATG GCGGCAGGCG TGTCCACGAC CGAAGAAGAC
CGCGCCCGTG GAACACTCAG ATCGCAACTT TCACGGTCGG TTATTCAGTT TATCGGCGCG
CATGCCGCAG ACCCCACACT GACCCCCGCC AAAGCGGCAC AGCACTTCAA AATATCGGTC
CGCTACGTCC ACCGTCTTCT TGAGGAGAGC GGGGAGACCT TCAGCCGCCT GCTGCTCAAG
CGGCGTTTGG AGCGATGTGC CGACGATCTC CGTGCTGAGG CCGCAATTTC AATCAGTGAA
ATCGCGTTCC GGTGGGGATT CAACGACCTT TCACACTTCA GTAAAACCTT CAGGCACCAT
TTCGGAGTGG CTCCTCGCGA CTATCGGGGC CAGTAG
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| Protein sequence | MAVWNANEMP ERDRFPYWRE VLCEAYIALN PILEGEQRFK GEVKANLLDC INVTTISSSR
QKIHRRRLDI SRMPHEVYFL NLQVKGQCRM MQGSREALLE PGDFSLVDST EPYLNDYCSD
DWTQYSFRIP RAMLKPLLKQ ADKQTAIRFT SAHPIASVAI DYLKSVAQNA EHIGTASTPI
ANHIVDLVAM AAGVSTTEED RARGTLRSQL SRSVIQFIGA HAADPTLTPA KAAQHFKISV
RYVHRLLEES GETFSRLLLK RRLERCADDL RAEAAISISE IAFRWGFNDL SHFSKTFRHH
FGVAPRDYRG Q
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