Gene Avi_5213 details

Gene Information

• Locus tag: Avi_5213
• ID: 7381343
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011988
• Strand: +
• Start bp: 211816
• End bp: 212613
• Gene Length: 798 bp
• Protein Length: 265 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 643648855
• Product: hypothetical protein
• Protein accession: YP_002547092
• Protein GI: 222106301

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.427112
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCAGGTC TCCTTCTTGT GCTGGCATTG GCTGGATGTA GCTCCGTTCC GCTCACTCAG 
TCCGGTACGC TGTCCTCCTA TAAAGGCTTG GGGCCTGTTG AAGGTCGCTT CAGCAAATCG 
CGCAGTTTCG CGGATACCCC GGCTATAGTG GCGGCGCAAA CGGTTTCCAT TGCTCCCACA 
CGGCTGTCGC CGCTGGCCTC TTCGAGGCTC CATGACGCCG GGAATGACAG GCTGGTCTCC 
AATGCTCTGG ATCGCGCTAT GTGTATCGAT CTCAGTGATA AATACCGGAT TGTCGGTCCC 
GGAGAGGCGG CTGATCTCAT TGTTCACGCT GTAATAACCG ACATAGTCCC GACCAGCAAA 
GCCGTGGCGG GCCTGTCGAC CGCAGTCACA TTGGGAACCT CCTTTGTTCT TCCCGTGGGT 
GTCCCGCGTC TGCCGATCGG ACTAGGAGGC CTGGCTGTCG AGGCGGAAGC GGTTGATGCA 
AAAGGGGAAC AACGAGCGGC CATCGTCTGG TCGCGCGGTG CAAATTCCAT CACCAATACT 
GCACGTGTTT CAGAAGTCGG TGACGCCTAT GGCCTTGCAT CTTCATTTGC CAGCCAGTTC 
TCAGAGATAC TCGTAAAAGG CCGGAAGTCC TCTGGTTTGG ACCTTTCCTT GCCCTCAGGC 
CAAAAAATGA AGTCACAGCT GGGTGGAAAG CCTAAAAATG CGGCGTGTGA GGTGTTCGGG 
CGGGCGCCGG GTCTCGGTGG TGTTCTGTCT GGTGTCGTTG GTGCTCCACC GTCCTGGACA 
GATCATCCAA CCAAGTGA 

 

Protein sequence

MAGLLLVLAL AGCSSVPLTQ SGTLSSYKGL GPVEGRFSKS RSFADTPAIV AAQTVSIAPT 
RLSPLASSRL HDAGNDRLVS NALDRAMCID LSDKYRIVGP GEAADLIVHA VITDIVPTSK 
AVAGLSTAVT LGTSFVLPVG VPRLPIGLGG LAVEAEAVDA KGEQRAAIVW SRGANSITNT 
ARVSEVGDAY GLASSFASQF SEILVKGRKS SGLDLSLPSG QKMKSQLGGK PKNAACEVFG 
RAPGLGGVLS GVVGAPPSWT DHPTK