Gene Avi_5200 details

Gene Information

• Locus tag: Avi_5200
• ID: 7381334
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011988
• Strand: +
• Start bp: 199667
• End bp: 200209
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 643648847
• Product: acetyltransferase
• Protein accession: YP_002547084
• Protein GI: 222106293

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGATA CATTCGTTTA CACCTCGCCG CTCGATCCCT TGGCAAAGCC GCTGATCGAC 
GATCTGATCC GTGAATATGA CAGCCGCTAC GGGACGTTTT TCAGCGCGGA GGGCGCGGTA 
GAGGAAATCA ACCGCTATCC TGCGGAAGCT TTTCAGCCGC CGTTCGGCAC TTTCCTGTTG 
CTGCTGCGCG ATGGCCAGCC GATCAGCGGG GGTGCCTTCA AGTTTTATGA CGAGACCACC 
GCCGAATTCA AACGCATCTG GACCCATCCC GATTATCGGC GCCAGGGGCT TGCACGCATC 
GTACTGGAAG AACTGGAAGC CCAGGCAGCG CGGCAGGGCT ATGAACGCAT CTACCTCACC 
ACCGGTTTTC GCCAACCGGA GGCGGTTGGG CTCTACCTGA AGAATGGCTA TAGCGCCCTG 
TTCGATCCGG CGGTCGATCC CGAAATCCAT CGGACACTGC CCTTCGAGAA GGACATCCGC 
CATCTCGCCG TAGGCGATGA AAAGCCGCAG CTTCGCCCGG AGCGCCGTGC GGTCTCCGTA 
TAG 

 

Protein sequence

MTDTFVYTSP LDPLAKPLID DLIREYDSRY GTFFSAEGAV EEINRYPAEA FQPPFGTFLL 
LLRDGQPISG GAFKFYDETT AEFKRIWTHP DYRRQGLARI VLEELEAQAA RQGYERIYLT 
TGFRQPEAVG LYLKNGYSAL FDPAVDPEIH RTLPFEKDIR HLAVGDEKPQ LRPERRAVSV