| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5195 |
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| Symbol | |
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| ID | 7381330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 194252 |
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| End bp | 195328 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643648843 |
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| Product | transcriptional regulator LacI family |
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| Protein accession | YP_002547080 |
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| Protein GI | 222106289 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGGAA CGCCCGAGCA GCCTGGATCG CCTGTGAAAC GCACCCGTGA AGGCAGCGGC
AGGGCAAGGC TGGAGGAGGT TGCGCGACGG GCTTGCGTTT CGACAGCCAC GGTTTCTCGT
GCGTTCAACA CGCCCGAAAG GGTTTCTCCT GAAACACGCG AGCGGATTTT CTCAACCGCC
AAGGCCCTGG GTTGGGTTCC CAATGCTGCG GGCCGGGCGT TGGCATCGAA CCGCACCCAT
ATTGCCGGTG TCATCATTCC AACGCTGGAC AATGAAATCT TCTCCCATCA GGTCGGTGCA
ATGCAGCGGG TGTTTGCCGA ACACGGATTG AACCTGCTGA TCGCCTGTTC GAATTACGAT
CCTGAACTGG GTTTCCAACA GGCAAAAGCC ATGATCGAGC GCGGCGTGGA AGCGCTGGCG
CTGGCTGGCG AATCCCATCC TCAGGCGCTC TATGACAATC TGGACAATCT CGACATTCCC
TATGTGCTGA CCTATGCCTA TCGACAGGGC GCCTCGCATG CCATGGTGGG CTTCGACAAT
GCCGCAGCCT TTGCCCGGAT GACCGATTAT CTTCTCGGCC TTGGCCATCG ACGCATCGCT
GTCGTCATGC AGCCCAAAGA CAATAATGAC CGCGTGGTAG CGCGCCTCAG TGGCATCACA
GCCGCTCTTA GCGCAGCAGG ATTGGAACTT TCGCCCGATC ATTTGATCAG CGACAAGGCT
AGTCTGGATT TTGGCATCGA AAGCGCCAAG CGGCTCGCGC AAGAGCCAAC GGACATCCGT
CCGACTGCGA TCATTTGCGG AAACGATACT CTGGCACTCG GCGTGCTGAT GGGCTTGGCA
CAGATGGGAG CAAGCGTTCC GGGCGATTTT TCGGTGACGG GTTTCGACGA TCTGGAACTC
TCGTCCCGAC TGTCTCCGGC ACTCACCACG ATGTTTGTCG ATAATAAGGA AATCGGTCGC
ATTGCCGCAG AACAACTCGT TCTGTGTCTT GGAGGCGAGA TAGCCTCGCC TCAATCCCGG
GAAATATCGG TCAGCTTGCA TATTCGGGAA AGTACAGCGG CCCCGCAAAC GAGATAG
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| Protein sequence | MTGTPEQPGS PVKRTREGSG RARLEEVARR ACVSTATVSR AFNTPERVSP ETRERIFSTA
KALGWVPNAA GRALASNRTH IAGVIIPTLD NEIFSHQVGA MQRVFAEHGL NLLIACSNYD
PELGFQQAKA MIERGVEALA LAGESHPQAL YDNLDNLDIP YVLTYAYRQG ASHAMVGFDN
AAAFARMTDY LLGLGHRRIA VVMQPKDNND RVVARLSGIT AALSAAGLEL SPDHLISDKA
SLDFGIESAK RLAQEPTDIR PTAIICGNDT LALGVLMGLA QMGASVPGDF SVTGFDDLEL
SSRLSPALTT MFVDNKEIGR IAAEQLVLCL GGEIASPQSR EISVSLHIRE STAAPQTR
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