| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5194 |
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| Symbol | |
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| ID | 7381329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 192570 |
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| End bp | 193880 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643648842 |
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| Product | Permeases of the major facilitator superfamily |
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| Protein accession | YP_002547079 |
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| Protein GI | 222106288 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCA TTGTCAGTTC CGAGCCCTCG GCCCCGCTGG GGTCAACCCA AGCCAAGGCA
CCGCCGCGTA TCCGGCGCAT GCAGATCACC TCGCTTTGCC TGCTGGTGGT GGCTGGCGTC
ATCAATTACA TGGATCGTGG GACGCTGGCG GTTGCCAATC ATCGGATCAC CGAAGACATG
GGTTTGACCC TCGGTGAAAT GGGCCTGCTG CTCTCGGCAT TTTCCTGGAG CTATGCGCTG
GCGCAGCTTC CGGTTGGAGC AATGGTGGAC CGTCTCGGAC CGCGTCGCCT TTTGGGTTTC
GGTCTGGTGT TCTGGTCGCT GGCCCAGGCC GCCGGAGGTT TTGTCACGTC CTTTACCCAG
TTTATCCTGA GCCGTATCGG TCTGGGCATT GGTGAAGCGC CGCAATTTCC GTCGGCTGCC
CGGGTTGTCA GCAACTGGTT CCCGGTGAGT AAGCGCGGCG TGCCAACAGG CATCTTCAAT
TCAGCCTCTC CACTGGGCAC AGCTATCGCG CCTCTGCTCC TGACACAGCT TCTGATCGTT
CTGGATTGGC GCTGGGTCTT CATCATCACC GGTGCTGCTG GCCTGGTCAT GGCCGCATTC
TGGTTCATGC TGTATCGTGA CCCAAAGGAT ATGGGGCTGA CCGCTGAGGA ACGCTCGTAC
CTCTCTTCGG AGACGGAAGA AAAGCAGCAG AAGGTGACGC TTGCCGATTG GGGCCAGCTG
TTTTCCTATC GCGCCACCTG GGGCATGATC CTTGGCTACT TCGGCAATGT TTACCTTAAC
TGGGTTTATC TCAGCTGGTT GCCATCCTAT CTGGTCAATG AACGGCACAT GAGCCTTGCC
CGCACCGGTT TCATGGCCTC CGTCCCGTTC TTCTGCGGCT TTATCGGCTG CCTCGTGGCT
GGCTGGCTGT CGGACAAGAT CATTAAGAAA ACCGAGGCTT CACCGGTCCG TGGTCGTCGC
ATTCCTGTTG TCATCGCCAT GCTCGGCATG GCCGCCTTCA CCGTGCCTGC GGCGCTGGTT
GCCGACAATA ACATTGCGAT TTTCTGCATT TCCGTGGTGA TTTTCCTCAC CAATGCCGCC
TCTGCCTGCT CTTGGGCGCT GGTGACAGCC GTTGCTCCGA AAAACCGGGT GGCGTCACTC
GGTTCCCTGC AGAATTTCGG CGGATTCCTG GGTGGCTCCC TGGCTCCGAT CGCAACCGGG
TTTATTGCCG AATACTCGTC TTTCGTACCC GCCTTGCTCA CCGGAGCTGC CATCGCATTC
GTTGGTGCCG CCAGCTACTT CTTCCTGGTT CGTGAACCGA TGGACCAGTG A
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| Protein sequence | MSTIVSSEPS APLGSTQAKA PPRIRRMQIT SLCLLVVAGV INYMDRGTLA VANHRITEDM
GLTLGEMGLL LSAFSWSYAL AQLPVGAMVD RLGPRRLLGF GLVFWSLAQA AGGFVTSFTQ
FILSRIGLGI GEAPQFPSAA RVVSNWFPVS KRGVPTGIFN SASPLGTAIA PLLLTQLLIV
LDWRWVFIIT GAAGLVMAAF WFMLYRDPKD MGLTAEERSY LSSETEEKQQ KVTLADWGQL
FSYRATWGMI LGYFGNVYLN WVYLSWLPSY LVNERHMSLA RTGFMASVPF FCGFIGCLVA
GWLSDKIIKK TEASPVRGRR IPVVIAMLGM AAFTVPAALV ADNNIAIFCI SVVIFLTNAA
SACSWALVTA VAPKNRVASL GSLQNFGGFL GGSLAPIATG FIAEYSSFVP ALLTGAAIAF
VGAASYFFLV REPMDQ
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