| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5192 |
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| Symbol | |
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| ID | 7381327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 190980 |
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| End bp | 191459 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643648840 |
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| Product | hypothetical protein |
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| Protein accession | YP_002547077 |
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| Protein GI | 222106286 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2731] Beta-galactosidase, beta subunit |
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| TIGRFAM ID | [TIGR00022] uncharacterized protein, YhcH/YjgK/YiaL family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCACCG GCTCTCTTCA TCATTGGCAA TTTTACCGCG CCACTTTGCC GGCCTGTATC
ATCAGCGCCA TAGAGGCCGT CACGGCTCTC GATCTGCCCA ACCTGCCCAC GGGACGACAT
GAGATCGACG GCGAGGACAT TTTCCTGCTG ATCCAGGAAC TGTCGACCAA ACCGGCCAAC
CAGCTTCGGC CAGAGGCTCA TCGCCGCTAT ATCGATATCC AGATCCTGCT TGAGGGACGG
GAAGCCTATG GCGTGGCCTT TCCCGACCCA CACCTTGTTC CGATTGACGA CCGCCTGGAG
ACGCAGGATA TCGCCTTTTA TCCCGCACGA CCCAGTGAGT ATTCTGTGGA GCTTAGCGCC
GACGATTTCA TCGTGTTCTT CCCGGGAGAG TTTCACCGTC CCTGCTGCGA GATCGGAGCC
CCCTTAGCGA TCCGCAAAGC AGTCATCAAG ATCGATGCCA GGCTGCTGGC GTCTCATTAA
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| Protein sequence | MITGSLHHWQ FYRATLPACI ISAIEAVTAL DLPNLPTGRH EIDGEDIFLL IQELSTKPAN
QLRPEAHRRY IDIQILLEGR EAYGVAFPDP HLVPIDDRLE TQDIAFYPAR PSEYSVELSA
DDFIVFFPGE FHRPCCEIGA PLAIRKAVIK IDARLLASH
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