| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5190 |
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| Symbol | katA |
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| ID | 7381326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 187946 |
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| End bp | 190129 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643648839 |
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| Product | catalase |
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| Protein accession | YP_002547076 |
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| Protein GI | 222106285 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0376] Catalase (peroxidase I) |
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| TIGRFAM ID | [TIGR00198] catalase/peroxidase HPI |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.473568 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATACCA AGGTTGAAAC TGGTGGAAAA TGTCCGGTTG CGCACGGGCC AGCTGGCGCG
AAGGGTCGGG GCAACCGCGA TTGGTGGCCT GAACAGCTCG ATGTGCAGAT CCTTCACCAA
AAGAACAAAA TCGCCGATCC AATGGGCCCT GACTTCGATT ATGCCGAAGA ATTCAGGAAG
CTCGACTATG AAGCCCTGAA GAGCGATCTT CATGCGCTGA TGACCGATTC TCAGGATTGG
TGGCCAGCCG ACTTCGGCCA TTACGGCGGC CTCTTCGTCC GCATGGCATG GCACAGCGCC
GGCACCTATC GCATCACCGA TGGCCGCGGC GGAGCAGGCG CCGGGCAGCA GCGTTTTGCG
CCGCTCAACA GCTGGCCGGA CAATGCAAAT CTGGACAAGG CACGCCGTCT GCTCTGGCCG
ATCAAGCAGA AATACGGCAA CAAGATTTCC TGGGCCGATC TCTTCATTCT GACCGGCAAC
GTTGCCTTGG AATCCATGGG CTTCAAGACC TTCGGTTTCG CTGGCGGACG CGCCGACACA
TGGGAACCGG AAGAACTGTT CTGGGGTCCA GAAGGCACCT GGTTGGGCGA TGAACGCTAC
AGTGGGGAAC GCCAGCTGTC TGAACCGCTT GGCGCCGTGC AGATGGGCCT TATCTACGTC
AATCCGGAAG GCCCCAATGG CAATCCTGAT CCGATTGCTG CGGCGCGTGA TATCCGCGAG
ACGTTTAGCC GCATGGCAAT GAACGACGAG GAAACCGTCG CATTGATCGC CGGCGGTCAT
ACTTTCGGCA AGACGCACGG CGCGGGCGAT CCGTCGCTAA TCGGGGCAGA ACCGGAAGGC
GGCGCACTCG AAGACCAGGG CCTTGGCTGG AAAAGCAAGT TCGGCACTGG TTTCGGCGCA
GACACGATCA CCGGCGGCCC TGAAGTCACC TGGACGCAGA CCCCGACCCG TTGGAGCAAT
TTCTTCTTCG AAAACCTCTT CAACTTCGAA TGGGAACTGA CAAAAAGCCC GGCTGGCGCC
CATCAATGGA AGGCAAAGAA CGCCGAACCC TCCATCCCGG ATGCCCATGA TCCGTCCAAG
AAGCACCTTC CAACCATGCT GACGACGGAC CTGTCGCTGC GTTTCGATCC GGCTTACGAA
AAGATTTCTC GCCGCTTCCT GGAAAACCCT GATCAGTTCG CTGATGCTTT CGCCCGCGCC
TGGTTTAAGT TGACCCACCG CGACATGGGG CCAAAGGTTC GTTATGTCGG TCCGGAAGTG
CCGTCTGAAG ATCTGATCTG GCAGGATGTT ATTCCTCCTG TCGATCATCC GCTTGTCGAC
GATAGGGATG TGGCCGATCT GAAAGCCAAG GTTATCGCGT CCGGTCTTTC GGTGCAGGAA
CTGGTTTCGA CAGCGTGGGC ATCGGCTTCG ACCTTCCGGG GTTCCGACAA GCGCGGCGGT
GCCAATGGCG CTCGCATCCG TCTTGCTCCG CAGAAGGACT GGGACGTCAA CCACCCGGCG
CAGCTTGCCA AGGTCCTGAG CGTTCTCGAA GGGTTCCAGC AGGAATTCAA TGCCGGCCAA
TCTGCGGGTA AAAAGATTTC CCTGGCTGAT CTGATCGTGC TTGCCGGTGC AGCCGGTGTC
GAGAAAGCAG CAAAGGCTGG CGGTCACGAT GTCACCGTTC CGTTTACCCC AGGCCGGACA
GATGCGTCGC AGGAACAGAC CGATGTCGCC TCCTTCAATG CATTGAAGCC ACGCGCCGAT
GCTTTCCGCA ACTATCTGAG CGGGCATCAA TTCATGAAGC CGGAAGAAGC GCTTGTCGAC
CGTGCACGAC TTCTGACCCT GACGGCACCT GAAATGACCG TTCTCATCGG TGGTCTGCGC
GTGTTGAAGG CCGGCCAGCC GGAACATGGT GTCCTCACCC GCAATCCCGA GGCGCTGACG
AATGATTTCT TCGTCAACCT GCTCGACATG CGCACGCAGT GGGCGCCAGT TGCAGGCAAA
GAGGGCGTCT ATGAAGGTCG AGATCGCAAG AGCGGCGAAC TGCTTTGGAC CGGGACGCGC
GTGGATCTGA TCTTCGGATC GCACTCGCAG CTTCGCGCCT TGGCGGAAGT CTATGCGCAG
TCGGATATCA AGGAAAAATT CGTCAAAGAC TTCGTTGCGG CCTGGACGAA AGTGATGAAC
GCCGATCGTT TCGATCTGGT CTGA
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| Protein sequence | MDTKVETGGK CPVAHGPAGA KGRGNRDWWP EQLDVQILHQ KNKIADPMGP DFDYAEEFRK
LDYEALKSDL HALMTDSQDW WPADFGHYGG LFVRMAWHSA GTYRITDGRG GAGAGQQRFA
PLNSWPDNAN LDKARRLLWP IKQKYGNKIS WADLFILTGN VALESMGFKT FGFAGGRADT
WEPEELFWGP EGTWLGDERY SGERQLSEPL GAVQMGLIYV NPEGPNGNPD PIAAARDIRE
TFSRMAMNDE ETVALIAGGH TFGKTHGAGD PSLIGAEPEG GALEDQGLGW KSKFGTGFGA
DTITGGPEVT WTQTPTRWSN FFFENLFNFE WELTKSPAGA HQWKAKNAEP SIPDAHDPSK
KHLPTMLTTD LSLRFDPAYE KISRRFLENP DQFADAFARA WFKLTHRDMG PKVRYVGPEV
PSEDLIWQDV IPPVDHPLVD DRDVADLKAK VIASGLSVQE LVSTAWASAS TFRGSDKRGG
ANGARIRLAP QKDWDVNHPA QLAKVLSVLE GFQQEFNAGQ SAGKKISLAD LIVLAGAAGV
EKAAKAGGHD VTVPFTPGRT DASQEQTDVA SFNALKPRAD AFRNYLSGHQ FMKPEEALVD
RARLLTLTAP EMTVLIGGLR VLKAGQPEHG VLTRNPEALT NDFFVNLLDM RTQWAPVAGK
EGVYEGRDRK SGELLWTGTR VDLIFGSHSQ LRALAEVYAQ SDIKEKFVKD FVAAWTKVMN
ADRFDLV
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