| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5167 |
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| Symbol | rbsA |
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| ID | 7380965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 160872 |
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| End bp | 162425 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643648818 |
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| Product | ABC transporter nucleotide binding/ATPase protein (ribose) |
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| Protein accession | YP_002547055 |
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| Protein GI | 222106264 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGAGA GACAGCCTGC GGAGGGCGAT GCAATCCGCT TTCATGGCAT TTCCAAACGG
TTTGGCGGAG CAAGAGCGCT GGCCGAGGTA TCGTTTGGCA TTCGCGCTGG AACGATCCAT
GGGCTTGTCG GCCAGAATGG CGCGGGAAAA TCGACCCTGA TCAAGATTCT CGCCGGTCTT
CACCGGCAGG ATGACGGAAC GATCAAGATC GACGGGGTCG CAATACAGAA TCTGACGCCG
CCGCTGGTCG AAAAACTGGG CATCCATTTC ATTCATCAGG ATCGCCTTCT GGTCTCGTCC
TTCACGGTTG GCGAGGCCTT GTTTCTGGGG TGCGAACCGA AGATTGCCGG CACGCCATTT
CTGGATCGGC GCGCGATGAA ACGCCAGGCG CAGGCGATTT TGCAGGACTA TTTCGGCCTG
AGCCTGCCGA CCAATGCATT GATCGGCGAG CTGACCACCG CGCAAAAGCA GATCGTCCAG
ATCACACGCG CACTGCTGGC CAAGCCCAAG GTGCTGGTGT TCGACGAACC GACGGCGGCG
CTGGTGCGGC GCGAGGCCGA TATGCTGTTT TCCCTGATTC GACGGCTGCG GGACGAGGGG
GTGACGATCG TTTACATCTC GCATTACTTG GCCGAAATCG AAGCGCTTTG CGACGACGTG
ACCGTGCTGC GCAATGGTGA GGTCGTTGCC AGCCGCTCGC TTGCCGGTCT TTCGGCAAAA
CAGATTGCAA CCCTGATGGT GGAGCGCGAT ATTGCCGAGA TGTTTCCAAA ATCGGTCGTC
GCCAAGGGCG AGCGCCTGCT GGACGTTCGT GGCTTGACAG CCGAAGGCCA GTATCAGGAC
GTGTCCTTCA GCCTGCACCG GGGCGAAGTG CTCGGCATCA CCGGTCTTTT AGGCTCCGGT
GCCAAGGAAC TGTTGCAGAC ACTGTTTGGT CTGGAAACAG CAGGCTCGGG CACCATTCAA
ACGGACGAGA CGGTGGTGTC ATTCGACAGC CCACATCAGG CCGTGTCGCG CAATCTGGCG
CTTGTGCCGG AAGACCGGCG CGGCAATGGC GTGGCTTTGG ACCTCACGGT GGCGGAAAAC
ATCACGCTTG CCAGTCTCGA CCGCTTTTCA AGGGCGGGTT TCCTGAAGAC CGGTCTTGAG
AAGAGTGCGG TGGACCGGCT GATCGCGCAA TTGCAGATCA AGACGGCAGG CCGCGATGCA
CCGGTAAGAA CCCTGTCCGG TGGCAATCAA CAGAAGGTGG CGATTGCAAA ATGGCTGAGC
CGCCAATCGG AAATCTATCT TCTGGACGAG CCGACTGTTG GCGTCGATAT CGGCGCGAAA
GTCGAAATTT ACCAGCTGAT CGGCGAGCTG GTCGAAAAGG GCGCTGGCGT CATCATCCTG
TCGTCCGACC TGCCGGAACT GGTTGGCATA ACCGACCGGA TTCTGGTGTT TTTCCGGGGT
CGGATCACGG CGGAACTCAT GTCCAGCCAG ACGACGGCGG ACGCAGTCTT TGCGAGCGCG
ACCGGCTCGG ATGCCGCAAC GGGGTCGAAG GAAGGATTGC GCCATGTCGG CTGA
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| Protein sequence | MRERQPAEGD AIRFHGISKR FGGARALAEV SFGIRAGTIH GLVGQNGAGK STLIKILAGL
HRQDDGTIKI DGVAIQNLTP PLVEKLGIHF IHQDRLLVSS FTVGEALFLG CEPKIAGTPF
LDRRAMKRQA QAILQDYFGL SLPTNALIGE LTTAQKQIVQ ITRALLAKPK VLVFDEPTAA
LVRREADMLF SLIRRLRDEG VTIVYISHYL AEIEALCDDV TVLRNGEVVA SRSLAGLSAK
QIATLMVERD IAEMFPKSVV AKGERLLDVR GLTAEGQYQD VSFSLHRGEV LGITGLLGSG
AKELLQTLFG LETAGSGTIQ TDETVVSFDS PHQAVSRNLA LVPEDRRGNG VALDLTVAEN
ITLASLDRFS RAGFLKTGLE KSAVDRLIAQ LQIKTAGRDA PVRTLSGGNQ QKVAIAKWLS
RQSEIYLLDE PTVGVDIGAK VEIYQLIGEL VEKGAGVIIL SSDLPELVGI TDRILVFFRG
RITAELMSSQ TTADAVFASA TGSDAATGSK EGLRHVG
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