Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5158 |
Symbol | |
ID | 7380958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | - |
Start bp | 151739 |
End bp | 152992 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643648811 |
Product | hypothetical protein |
Protein accession | YP_002547048 |
Protein GI | 222106257 |
COG category | [S] Function unknown |
COG ID | [COG5276] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACCC TAGACCTGCC AAAGCCAGAC TTTGCCCGCA ATATGAAACT GATCGGCCAT AGCGACATTG GCGGACGCGG TGATGGGCTG CAATTGATGG TGCATCATGG CCATGCCTAT GTGGCGCATC CGTGGTCGCA GGGCTTCTCC ATTATCGATG TGCGTGATCC GAAACATCCG AAAACCGTGA ACTACGTGCA GGCCCCCGCC AACACATGGA ACATCCATCT GCAAACCCAT GGTGATCTGC TGTTGGTGAT CAACGCCCTT GATCTGTTTG CCGATGTGGA AAGTTTTACG GATGAAAAAG CCTATTACAC CCAATCAGTC GGCGAAACGG TCGCTGCCAG CAAGCGCGAA CGGGCGTGGA CAGCGGGCAT GACGGTCTAT GACATTTCCA CACCAGCCGC CCCGCGCAAG ATCGGGCAAT TGGATGTGGA TGGCGTGGGC TTTCATCGGC TCTGGTATGT TGGCGGGCGC TATGCCTATG CATCGGCGCT GCTCGATGGC TTTTCCGATT ATATTTTCGT GACCATCGAC ATGGCTGATC CCACCAAGCC GGAACTGGTT GGCCGCTGGT GGTTGCCGGG CATGAACACA GCAGCAGGCG AAAGCCGCAC ATGGGCGGAT GGCAAACGCT ATGCCCTGCA CCACGCGCTG GTGCATGGCG ACACGGCCTA TGCCTGCTGG CGCGATGGCG GGCTGACACT TCTCGACATC AAGGACCATT CAGCACCCAA ACTCATCAAG CACCACAATT GGTCCCCACC CTATGGCGGC GGCACCCATT CGCCTTTGCC GCTGCCGGGG CGTGATCTGC TGGTCGTGGC AGATGAAGCG GTGCTGGATA ATGAAGAAGA TGGCCGCAAG CACACATGGG TGTTTGATAT CCGCGTGCCG GAAAATCCGA TCAGCATCTC CACCTTCCCG ATCCCGAATG AGATCGATTA CACCCAGAAA GGCGGCCATT TTGGCCCCCA TAACCTGCAT GAAAACCGGC CCGGCTCATT TGTGTCCGAC ACGCTGATTT TCGCCACCTG GCAAAATGCA GGCATCCGCG CTTTTGATAT TTCTGATCCA TACCATCCGG TGGAAACAGG CGCTCTGGTG CCTGCCGCCC CCACCACGAT GACGGACCGC AGACCCGGTC GCCCCAAGGT CATCCAGTCG GCGGATGTGT TTGTGGATGC CAATGGCTTA ATCTACGCCA CCGATTACAA TGCGGGGCTG GAGATCATTG AATATGGCGG CTGA
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Protein sequence | MTTLDLPKPD FARNMKLIGH SDIGGRGDGL QLMVHHGHAY VAHPWSQGFS IIDVRDPKHP KTVNYVQAPA NTWNIHLQTH GDLLLVINAL DLFADVESFT DEKAYYTQSV GETVAASKRE RAWTAGMTVY DISTPAAPRK IGQLDVDGVG FHRLWYVGGR YAYASALLDG FSDYIFVTID MADPTKPELV GRWWLPGMNT AAGESRTWAD GKRYALHHAL VHGDTAYACW RDGGLTLLDI KDHSAPKLIK HHNWSPPYGG GTHSPLPLPG RDLLVVADEA VLDNEEDGRK HTWVFDIRVP ENPISISTFP IPNEIDYTQK GGHFGPHNLH ENRPGSFVSD TLIFATWQNA GIRAFDISDP YHPVETGALV PAAPTTMTDR RPGRPKVIQS ADVFVDANGL IYATDYNAGL EIIEYGG
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