| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5154 |
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| Symbol | |
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| ID | 7380954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 146569 |
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| End bp | 147972 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643648807 |
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| Product | nitrilotriacetate monooxygenase |
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| Protein accession | YP_002547044 |
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| Protein GI | 222106253 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.866117 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAGGA CAATTCACTT CAACGCCTTC GATATGAATT GCGTCGGACA CCAATCGCCT
GGATTGTGGG CGCATCCAGA CGACAGGTCT TATACCTATA AGGATCTGGA TTATTGGCAG
AATTTGGCGC GTACCCTGGA GCGCGGCATC TTTGATGGCA TCTTCATTGC TGACGTGATC
GGCTATTACG ATGTCTATAA AGGCTCCAAT TTCCACGCCA TCCAGCAGGC GGCGCAAATT
CCGGTCAACG ATCCGTTGCA ACTGGCCGCA CCCATTGCTT TGGCCACCGA ACATCTGGGC
ATTGGCATCA CCGCATCAAC CTCGTTTGAG CATCCCTATA CGTTTGCCCG CAGACTCGCG
ACGGCCGACC ACCACACCAA GGGCCGGGTA GGGTGGAACA TTGTGACCTC CTATCTGGAG
AGCGGTGCCA AGAATGTTGG CCAATCCGGC CTGAAGCGCC ATGATAATCG CTATGAGATT
GCCAATGAAT ATCTTGAGGT GATCTACAAA CTGCTGGAAG GCAGCTGGGA AGAGGGCGCT
ATCATCCGTG ATCCGAAGGG GCGGGTTTTC ACCGATCCGG CCAAGGTTCA TGAAATCGGC
CATAAGGGCA AGCATTTCGA TGTTCCCGGT TATGGTTTGA CCGAGCCTTC GCCGCAACGC
ACTCCGGTGC TGTATCAGGC GGGCGCATCC GGTCCGGGCA AGAAATTTGC GGCGGAACAT
GCGGAATGCG TGTTTGTGGC GGCACCCACC AAATCGGTGC TGAAAGCCTA TGTTGCCGAG
ATTCGCCAGC AGGCTGCCGC TGCCGGGCGC GATCCGAATG CCCTCAAAAT CTACACGCTG
ATCACCATCA TTACCGATGA GACCGAGGCA AAGGCCAGGG CGAAGTTTGA AGATTATAAG
CAATATGTAT CCTACGATGG CTCGCTGGTG TTCATGTCCG GCTGGAGCGG CATTGATTTT
GGCCAATATG CGCCAACCGA TGTGATCCAG AAGGTAGAGA CCAACGCCAT CCATTCGTTT
GTCGAGCATA TCGCTGGCGG CGACAAATCC TGGACCATTG AAGAACTGGC AAAATTCGGT
GGCATTGGAG GGTTGGGTCC GGTGTTTGTT GGCGCGCCCG ATCAGGTTGC TGATATTTTG
CAAGAATGGG TGGCGGACAC CGATGTGGAT GGCTTCAACA TTGCCTATGC GGTCACGCCC
GGCAGTTTTG AGGATGTGGT CAACCACATT GTACCGGAAC TGCAAAAGCG CGGAGCCTAT
CCCACCGCCT ACAAACCCGG AACCCTGCGC GAAAAGCTGT TCGGCCAAGG GCCATATTTG
CCGCAAAACC ATCCCGCCGA TCAATACCGC GATATTGAGG CGTTCAAGCG CGCCCAAAAG
GCTCCGCTGG CTAATGCCAG CTAA
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| Protein sequence | MTRTIHFNAF DMNCVGHQSP GLWAHPDDRS YTYKDLDYWQ NLARTLERGI FDGIFIADVI
GYYDVYKGSN FHAIQQAAQI PVNDPLQLAA PIALATEHLG IGITASTSFE HPYTFARRLA
TADHHTKGRV GWNIVTSYLE SGAKNVGQSG LKRHDNRYEI ANEYLEVIYK LLEGSWEEGA
IIRDPKGRVF TDPAKVHEIG HKGKHFDVPG YGLTEPSPQR TPVLYQAGAS GPGKKFAAEH
AECVFVAAPT KSVLKAYVAE IRQQAAAAGR DPNALKIYTL ITIITDETEA KARAKFEDYK
QYVSYDGSLV FMSGWSGIDF GQYAPTDVIQ KVETNAIHSF VEHIAGGDKS WTIEELAKFG
GIGGLGPVFV GAPDQVADIL QEWVADTDVD GFNIAYAVTP GSFEDVVNHI VPELQKRGAY
PTAYKPGTLR EKLFGQGPYL PQNHPADQYR DIEAFKRAQK APLANAS
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