| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5150 |
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| Symbol | |
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| ID | 7380951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 141303 |
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| End bp | 142076 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643648804 |
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| Product | ABC transporter nucleotide binding/ATPase protein (branched chain amino acid) |
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| Protein accession | YP_002547041 |
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| Protein GI | 222106250 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.915192 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGACG CCAGATTGTT GCAGGTGGAT GGGCTGCACG CCACCTACAA TCATGCCATC
ACCGCTTTGC ATGGTGTCAG CTTTTCGCTT GCGCGGGGCG AGATCCTAGC ACTTTTGGGC
GCGAATGGAG CGGGCAAGAC GACGGCGCTG AAGGCGGTGT CAAACCTTCT TTCGGCAGAG
CGCGGACAGA TCAATGCCGG GTCTATCCAT TTTGACGGCG TAGATGTCAC CAAAACAAGC
CCGGCGGCGC TGGTGCGCGC CGGCCTTGTA CAGGTATTGG AAGGGCGCCA TTGCTTCCAT
AGCCTGTCCG TCGAGGAAAA TCTGACGTGT GGTGGTCTGG GACGTAGCAG TTCGCGGGCG
GAAATCGCCA ATGATCTCGA GCGTATTTAT GGGCTCTTTC CCCGACTGAA AGAAAAGCGC
CGGACACTGT CGGGCCTCAC CTCCGGTGGC GAGCAACAAA TGACGGCAGT TGGCCGGGCT
CTGATGTCGC GTCCCCGTCT GCTTGTTCTT GACGAACCGT CCATGGGTCT TGCCCCCATC
GTGGTGCAGG ACATATTTCG CACCCTGCGC CGATTGAACC GGGAGGAGGG GCTATCCATT
CTCGTCGCCG AACAAAATTC GGCGATTGCT CTCACCTATG CCCATCGCGC CACCATTCTC
GAAAATGGAA AGGATGTGCT GACGGGCACC GCCCGCGAGA TCCGCGAGCG AGACGATGTG
AAATCCTTTT ATCTCGGGCA GAACAATCGG GTTGCGAATG ACCATGTCAT ATGA
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| Protein sequence | MKDARLLQVD GLHATYNHAI TALHGVSFSL ARGEILALLG ANGAGKTTAL KAVSNLLSAE
RGQINAGSIH FDGVDVTKTS PAALVRAGLV QVLEGRHCFH SLSVEENLTC GGLGRSSSRA
EIANDLERIY GLFPRLKEKR RTLSGLTSGG EQQMTAVGRA LMSRPRLLVL DEPSMGLAPI
VVQDIFRTLR RLNREEGLSI LVAEQNSAIA LTYAHRATIL ENGKDVLTGT AREIRERDDV
KSFYLGQNNR VANDHVI
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