| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5146 |
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| Symbol | |
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| ID | 7380947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 136830 |
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| End bp | 137720 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643648800 |
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| Product | ABC transporter nucleotide binding/ATPase protein (branched chain amino acid) |
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| Protein accession | YP_002547037 |
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| Protein GI | 222106246 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.156661 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATTG CTATGCAGGC GGCCCGATCT GGTGCCATTT TCTTGGCTGA TCTCAGCGTA
TCGGTGGATG ATGTGGCTGC GGTCAACAGT GCAAAGGCTT CCTCAAATGC CTTGGCCCTC
TCTGGGGTCA CTCTGTCTTT TGGAGGCGTT GTAGCGCTCA GCGACATTGA TCTTAAGGTG
AGCAAAGGTG AAATCCGCGC AATTATCGGC CCGAACGGTG CTGGTAAGAG CTCCATCATC
AACGTGATCA GCGGTCTCTA TCAGCCGGAT CACGGCCGCG TTTCCATCGG CGAACTCCAT
TTCAGCCGCG TGCCGACCCA GAGGCTAGCG CAGCTTGGTA TTGCCCGAAC CTTTCAAAAC
CTCGCCCTGT TCAAGGGGTT GAGTGTTCTG GACAATGTCA TGGCGGGCCG CGTTTACCGC
AATAGATCCA GTTTTGTGGA GCAGATCATC GGCTATGGCA GGGCTGCCCG TGAGCATAAG
GATGCCCGCG ACAGATCGGT GGCAATTCTC GATTTTCTGC ATCTCACCGA CCTCAGGGAT
CGCCTTGCGG GTACTTTGCC TTATGGTCTT CAAAAGCGGG TGGAGCTTGC CCGTGCCCTG
GTCGCAGAAC CCGACATCTT GCTGCTGGAC GAACCAATGG CAGGCATGAC AGCCACCGAA
AAGAACGAAA TGGCGCATTA TGTGCGCGCC GCACGGGATG AATTTGGCAC CACTGTGGTG
TTGATCGAGC ACGATATTGG CGTCGTTATG GGCCTTTCCG ACCATGTGGC GGTGCTGGAT
TACGGGCGGA AAATTGCCGA TGGCACACCA GCGGAAATTT CCGCTGACCA GAAAGTCATT
GATGCCTATC TCGGTGTTGC ACCAGAGAAT GAAGACGGAG ATGGCATTTG A
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| Protein sequence | MTIAMQAARS GAIFLADLSV SVDDVAAVNS AKASSNALAL SGVTLSFGGV VALSDIDLKV
SKGEIRAIIG PNGAGKSSII NVISGLYQPD HGRVSIGELH FSRVPTQRLA QLGIARTFQN
LALFKGLSVL DNVMAGRVYR NRSSFVEQII GYGRAAREHK DARDRSVAIL DFLHLTDLRD
RLAGTLPYGL QKRVELARAL VAEPDILLLD EPMAGMTATE KNEMAHYVRA ARDEFGTTVV
LIEHDIGVVM GLSDHVAVLD YGRKIADGTP AEISADQKVI DAYLGVAPEN EDGDGI
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