Gene Avi_5131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_5131 
Symbol 
ID7380935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011988 
Strand
Start bp120518 
End bp121522 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content61% 
IMG OID643648788 
Productoxidoreductase 
Protein accessionYP_002547025 
Protein GI222106234 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGTCA ACGACAGGCG CAAGCTGCGC AATCGCGATG TTTCCTTCAC GGTGATGGGT 
CTGGGCTGTG CGCAGATGGG CAATCTCTAT CGCTGGACAA GTTACCAGGA AGCGCTCGGG
GCCTTCGATG CCGCCTGGGA TGCAGGCATT CGTTACTTCG ATACCGCTCC CTTCTATGGC
TACACCCGCT CCGAACGCCG TCTCGGGACG ATGCTGACCG AGCATGAGCG CGCAAACTAC
GTGCTCTCCA CCAAGGTGGG CCGCGTGATG GTCCCCGATG AGACCGTCGG ACCAGAGGAA
GACACCTATA TTCAGCCCCT GCCGTTCCGT CCGGTCTACG ACTACACCTA TGACGCCATT
CTGAAATCCT TTGAGGCAAG CCAGCAGCGC ACGGGCGTGC TGAAGCCTGA CATTCTCTAT
GTCCACGACA TCGGCCAGAT GACGCATGGT GCAAAACACG GGCATTATTG GGAACAGTTG
ACCAAGGGCG GCGGGTTCAA GGCGCTCGGC CAATTGCGCG ACGCTGGCCT CGTCAAGGCC
ATCGGCCTCG GCGTCAATGA ATGGCAGGCG GTCTGGGATG CGATGGATGC CTTCGATATC
GATGTCGCCA TGCTGGCCGG GCGCTACACG CTGCTGGAAC AGGACAGCCT GACGCTGCTG
GACCGGGCGG AAAAAGCCAA TGTTGGGATC GTCGTGGCCG GGGTCTTCAA TTCGGGCCTG
CTGGCGGGAA ACCGCAAGTT CAACTATGCC GAGGCACCCG CCGACATTCT TGCGCGCGTC
GCAGAAATCG AAGCGGCATG TGCCGCTGAA GGCGTATCGC TACAGGCGGC GGCCTTGAAT
TTTCCGCTGC TGCATCCCGC CGTCGTCTCC GTGGTATCCG GCGTCCGCAA CGCCGAGCAG
ATCCGCGCCA ACGTGGCCTG GATGCAGGAA GACGTCCCCT CCTCCGTGTG GCGATCCCTG
AAGGACAAGG GCATCATCGC CGATGGCGTC CCGATCGGAG TGTGA
 
Protein sequence
MQVNDRRKLR NRDVSFTVMG LGCAQMGNLY RWTSYQEALG AFDAAWDAGI RYFDTAPFYG 
YTRSERRLGT MLTEHERANY VLSTKVGRVM VPDETVGPEE DTYIQPLPFR PVYDYTYDAI
LKSFEASQQR TGVLKPDILY VHDIGQMTHG AKHGHYWEQL TKGGGFKALG QLRDAGLVKA
IGLGVNEWQA VWDAMDAFDI DVAMLAGRYT LLEQDSLTLL DRAEKANVGI VVAGVFNSGL
LAGNRKFNYA EAPADILARV AEIEAACAAE GVSLQAAALN FPLLHPAVVS VVSGVRNAEQ
IRANVAWMQE DVPSSVWRSL KDKGIIADGV PIGV