| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5128 |
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| Symbol | |
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| ID | 7380932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 117104 |
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| End bp | 118117 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643648785 |
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| Product | zinc-binding dehydrogenase |
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| Protein accession | YP_002547022 |
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| Protein GI | 222106231 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCGC TCATCTGCGA AGAACCCGGC CGCCTCTCCC TTATCGAGCG CGCGCCGCCA
CCGCGTGCAG AAAATGAGGT TCTCGTGCGG ATCCGCCATG TCGGCATCTG CGGCACGGAT
TTTCACATCT ATGCGGGCAA GCATCCCTTC CTTGAATATC CTCGCGTCAT GGGACATGAA
TTGTCGGGAA CGGTTGCGGA GGCGCCCGCA GGCAGTCATC TGAAGACCGG GGATGCCGTC
TATATTGTCC CCTACCTGTC CTGCGGCGCC TGCCATGCCT GCCGCAAGGG TCTCTCGAAT
GCCTGCCAGA ATATCCGGGT TCTTGGTGTT CACTGTGATG GCGGCATGGC CGAATATGTG
AGCGTGCCGG AAGAAAACGT CGTACCGACC GGTGGCATTT CACTTGCTGA TGCGGCGATG
ATTGAGTTTC TGGCCATCGG CGCTCATGGT GTGAAACGCG GTAACATCCA ACAGCAGGAT
CGTGTTCTCG TCACCGGCGC CGGCCCGATT GGCATGTCGG CCATCATCTT TGCCAAGGCG
AGAGGCGCGC ATGTGACTGT TATGGATACC CGCGAGGATC GCCTGGCCTT TGCCGTGGAT
CGCCTCATGG CGGATCAATC GCTGTTTGCC GATACTTCCG CCGAGGCCGA AGTTGAGAGG
ATGACGGGTG GCGATGGTTT CGATGTGGTG ATCGATGCCA CCGGTAATGC CATTCCGATG
CAGCGCGGTT TCAATTTCCT CGCCCATGGC GCACGCTATG TCCTGCTCTC CGTCGTTCGC
CAGGACATAA CCTTCTCTGA TCCGGAATTC CACAAACGCG AGGCAACGCT GATTGCCAGC
CGCAATGCCC AACCCGACGA TTTTGCCGAA GTCGTCCGCC AGATTGAGGC TGGCAAGGTG
CCGACGCGCG CTTTGAACAC CCATACCGGC CACCTTGATG ATAGCGTCAA GCTGTTCAAG
GAATGGTCCC AGCCGCAAGC CGGTGTGATC AAGGCTATTC TGGAGATTGG GTAG
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| Protein sequence | MKALICEEPG RLSLIERAPP PRAENEVLVR IRHVGICGTD FHIYAGKHPF LEYPRVMGHE
LSGTVAEAPA GSHLKTGDAV YIVPYLSCGA CHACRKGLSN ACQNIRVLGV HCDGGMAEYV
SVPEENVVPT GGISLADAAM IEFLAIGAHG VKRGNIQQQD RVLVTGAGPI GMSAIIFAKA
RGAHVTVMDT REDRLAFAVD RLMADQSLFA DTSAEAEVER MTGGDGFDVV IDATGNAIPM
QRGFNFLAHG ARYVLLSVVR QDITFSDPEF HKREATLIAS RNAQPDDFAE VVRQIEAGKV
PTRALNTHTG HLDDSVKLFK EWSQPQAGVI KAILEIG
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