| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5121 |
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| Symbol | melA |
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| ID | 7380925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 110353 |
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| End bp | 111825 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643648778 |
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| Product | alpha-galactosidase |
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| Protein accession | YP_002547015 |
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| Protein GI | 222106224 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1486] Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.642601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGCT TCAAGATCGC CATCATCGGG GCTGGCAGCG TCGGCTTTAC CAAGAAACTT
TTCGCCGACC TTTTGAGTGT GCCGGAGTTT CACGATGTGG AATTTGCGCT CACCGATATC
AGCCAGCACA ATCTTGATAT GATCAAGACA ATTCTGGATC GAATTGTCGA GGCAAACAGG
CTTCCTGCCA AGGTGACGGC ATCTACGGAT CGCCGCGACG CCATTTCGGG TGCGCGCTAT
ATTATCAGCT GCGTGCGCGT CGGCGGTCTT GGGGCCTATG CCGATGATAT CAGTATTCCG
CTGAAATATG GTGTCGATCA ATGCGTGGGC GATACGATTT GCGCAGGCGG CATTCTCTAT
GGCCAGCGCA ATATTCCGGT CATTCTGGAT TTCTGCAAGG ATATCCGTGA ACTGGCCGAG
CCGGGCGCGA AATTTCTCAA CTATGCCAAC CCCATGGCGA TGAATACCTG GGCGGCGATT
GAATATGGCA AGGTCGATAC GATTGGGCTT TGCCATGGCG TGCAGCACGG TGCAGAGCAG
ATTGCCGAGA TTTTGGGTGC CGATCCGGTT GAGCTGGATT ACATTTGCTC CGGCATTAAT
CACCAGACAT GGTTTGTCGA TGTGCGCGTC AAGGGCCGCA AGATTGGCAA GCAGGAGCTG
ATCGATGCCT TTGAGGCCCA TCCGGTGTTC TCGCAGCAGG AGAAGCTGCG TATCGATGTT
TTGAAACGCT TCGGGGTCTA TTCAACCGAG AGCAACGGCC ATCTGTCGGA ATATCTGCCT
TGGTACCGCA AGCGGCCTGA AGAGATTACC CGTTGGATTG ATATGTCCGA CTGGATTCAC
GGCGAAACCG GTGGTTATCT GCGCTATTCC ACTGAGACCC GCAACTGGTT TGAAACCGAG
TTTCCGCAGT TTCTGGAAAG TGCGGGCAAG CCGCATGATC CGGCCAAGCG CTCCAATGAA
CATGCCAGCC ATATTCTGGA AGCACTGGAA ACCGGACGGG TCTATCGCGG CCATTTCAAT
GTGAAAAACA ATGGCATCAT CACCAATCTG CCGTTGGATG CCATTATTGA ATCGCCCGGA
TTTGTCGATC GGTTCGGTAT CAACATGGTA GCGGGTATCA CCCTGCCGGA AGCCTGTGCG
GCCACCTGCA TTTCCTCCAT CAATGTCCAG CGGATGTCAG TGCATGCGGC TATTTCGGGG
GATATCGATC TTCTGAAACT CGCAGTGCTG CATGATCCGC TGGTGGGGGC GATCTGCACG
CCGGAAGAAG TCTGGCAGAT GGTGGATGAG ATGGTGGTGG CCCAGGCTGA ATGGCTACCG
CAATATGCCC ATGCCATTCC TGAAGCCAAA GAACGGCTGA GCCGAGGTAC CGTCAAGACC
CGCGATTGGA AGGGCGTTGC CCGGCGCGAT GTGCGTTCCA TTGATGAATT GAGGGCCGAA
AAGGAAGCGA CAAAGCTGAA GGCCGCAAGC TGA
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| Protein sequence | MSSFKIAIIG AGSVGFTKKL FADLLSVPEF HDVEFALTDI SQHNLDMIKT ILDRIVEANR
LPAKVTASTD RRDAISGARY IISCVRVGGL GAYADDISIP LKYGVDQCVG DTICAGGILY
GQRNIPVILD FCKDIRELAE PGAKFLNYAN PMAMNTWAAI EYGKVDTIGL CHGVQHGAEQ
IAEILGADPV ELDYICSGIN HQTWFVDVRV KGRKIGKQEL IDAFEAHPVF SQQEKLRIDV
LKRFGVYSTE SNGHLSEYLP WYRKRPEEIT RWIDMSDWIH GETGGYLRYS TETRNWFETE
FPQFLESAGK PHDPAKRSNE HASHILEALE TGRVYRGHFN VKNNGIITNL PLDAIIESPG
FVDRFGINMV AGITLPEACA ATCISSINVQ RMSVHAAISG DIDLLKLAVL HDPLVGAICT
PEEVWQMVDE MVVAQAEWLP QYAHAIPEAK ERLSRGTVKT RDWKGVARRD VRSIDELRAE
KEATKLKAAS
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