| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5117 |
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| Symbol | |
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| ID | 7380922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 105946 |
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| End bp | 107067 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643648775 |
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| Product | ABC transporter membrane spanning protein (oligopeptide) |
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| Protein accession | YP_002547012 |
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| Protein GI | 222106221 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCCG ATGTTCAAAC CATAGCCATG TCCTCTCCCG CCAATAATTT ACACAGCAAC
GAAACCTATC TGGCGCTGGT CTGGCGGCGT CTTCGGCGGT CATGGACCGG AATGATGGGC
CTTGTGCTGG TCTGCCTGCT GATGCTGATG GTGGTGTTTG CCGAGTTTTT CGCTCCCGTT
GATCCGAAGC TGACCGGCAC AGCCTTTGCG CCACCGCAGA CCATCAGCAT CACCGACCAA
GAAGGCAATC TCGTATGGCC CCGCACCTAT CCACTGGGGG AAAGCACGGC GCTTGACCCT
ATTACCTTCC AACCTATTTC TGGGCCAGAC TTTGAAAACC CCGTCAACCT TGGCTTTTTC
GTCAAGGGTT TCAGCTATAA CCTGTTCGGT CTTTTGCCCA GTGATCGCCA TTTCTTCGGT
GCAACGAATG GCACACCGGT GAATTTTCTT GGCACCGATA AATTTGGCCG CGATGTGCTG
TCACGTATCT TTTACGGCTC CCGCGTATCC TTGATGATTG CCTTGACGGT TGTGTTTATC
GTTACCGTGG TGGGTACAAC GGTCGGCTTG GTTTCCGGTT ATTATGGCGG CCAATTCGAT
ACATGGATGC AGCGCTTTGT AGAGCTGGTT CTGGCCTTCC CGCAATTGCC CCTCTATCTG
GCGCTGACTT CGCTGATCCC GGTCACAGCT CCCACCAATG TGTTTCTGGG CTTTGTCATC
GTTGTCATGT CGGCGCTGGG TTGGGCGCAG ATGTCGCGCG AAGTGCGCGG CAAAACACTG
GCGCTGGCCC GCATTGACTA TGTGCGGGCC GCCATGGCCA TCGGGGCCAC GGATCGGCGC
ATCATCCTTC AGCATATTTT TCCCAATGTG ATGAGCCATG TCATTGTGTC CGTCACACTG
GCCATTCCAA GCGTAGTTCT GCTGGAATCC TTCCTTGGTT TTCTGGGTTT TGCGGTCAAG
CCGCCGCTGA TTTCCTGGGG CCTGATGTTG CAGGATACCT CGACCTATTC GGTCATTGGG
TCCTATCCGT GGATCCTGTC TCCCGTGGCT TTCGTGCTGA TCACCGTCTT TGCGTTCAAT
GCGCTGGGTG ATGGGTTGCG CGATGCCGTT GACCCCTATT GA
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| Protein sequence | MKADVQTIAM SSPANNLHSN ETYLALVWRR LRRSWTGMMG LVLVCLLMLM VVFAEFFAPV
DPKLTGTAFA PPQTISITDQ EGNLVWPRTY PLGESTALDP ITFQPISGPD FENPVNLGFF
VKGFSYNLFG LLPSDRHFFG ATNGTPVNFL GTDKFGRDVL SRIFYGSRVS LMIALTVVFI
VTVVGTTVGL VSGYYGGQFD TWMQRFVELV LAFPQLPLYL ALTSLIPVTA PTNVFLGFVI
VVMSALGWAQ MSREVRGKTL ALARIDYVRA AMAIGATDRR IILQHIFPNV MSHVIVSVTL
AIPSVVLLES FLGFLGFAVK PPLISWGLML QDTSTYSVIG SYPWILSPVA FVLITVFAFN
ALGDGLRDAV DPY
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