Gene Avi_5113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_5113 
SymbolfabG 
ID7380918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011988 
Strand- 
Start bp101290 
End bp101853 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content57% 
IMG OID643648771 
Product3-oxoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_002547008 
Protein GI222106217 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTGCAGCAGG CGTGCCGCCT CGGAGAAACT ACCCGCTTCC AGCACCCTCG TGAAAACCTG 
AATCTCGCCG ATCCGGCGAC CGAAGCAGGG GCAAACGTGC TGACTGCGGC AGTCCCGAAG 
ATCGACATTC TCATCAACAA TCTCGGCATC TACGAATCCA AGGATTTCAG CGATATCACC 
GATGACGATT GGCGCCGGTT TTTCGAGATC AATGTGCTGA GCGGTGTCAG GCTCTCGCGG 
CATTACATGC CGGATATGCT GGCGCGAAAT TGGGGAAGAA TAATCTTCAT CTCCAGCGAA 
AGCGGCGTGC TGGTTCCGCC CAACATGATC CATTACGGCA TGACAAAGAC GGCGCAGCTC 
GCCATCGCGA GCGATCCAAA CCTGTCAGCC GACGCGATGG AAAGCGAATA TTTCGCCAAG 
GAGCGTCCGA GGTCGTTGAT CCAGCGAATG ATCGAGCCAG AGGAAATTGC CAATCTCGTT 
GCCTATGTGG CAAGCCCATT GTCCGCTGCA ACGAATGGCG CTGCCCTGCG CGTCGATGGC 
GGCATCACCC CGACGATCGT GTAA
 
Protein sequence
MQQACRLGET TRFQHPRENL NLADPATEAG ANVLTAAVPK IDILINNLGI YESKDFSDIT 
DDDWRRFFEI NVLSGVRLSR HYMPDMLARN WGRIIFISSE SGVLVPPNMI HYGMTKTAQL 
AIASDPNLSA DAMESEYFAK ERPRSLIQRM IEPEEIANLV AYVASPLSAA TNGAALRVDG 
GITPTIV