| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5112 |
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| Symbol | |
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| ID | 7380917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 100041 |
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| End bp | 101228 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643648770 |
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| Product | non-heme haloperoxidase |
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| Protein accession | YP_002547007 |
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| Protein GI | 222106216 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACAACC GGAAAAGTCG CCGCGTTCGC GTTAATCATC GCGACGCGGT TGTCGCCGAG
ACCCTCTCCA TTATTTCAAT AATCGCAATT AAATCTCAAT TAATAATGCA ATTGTTGGCA
AGGGTGTTTG GCGGCAATAT GCCCTCATCA GACAAACCGA GTGGTCTGAC GACACAGAAA
CAAACAAGAC CGCAGGACGC GAACATGACC GACACCACTC TTCTTTCCCT GACACGTCGT
GGCGTCCTGC TTTCCGGATC GGCCGTCGCC GCAACCGCGC TCACCGCATC ATTCAGCTTT
GCAGCCAAGC TCGCTGCGTC CACCAACACA TCAACCGAAG GAAACAAGAC CATGGGTACC
ATCACCACCA AGGACGGCGT TGAAATCTTC TACAAGGATT GGGGCTCGAA GGATGCTCAG
CCGATTGTAT TTCATCATGG CTGGCCGCTG TCATCGGATG ACTGGGACGC GCAGATGCTG
TTCTTCCTCG CCAACGGTTA CCGCGTGATT GCCCATGACC GGCGCGGCCA CGGCCGTTCG
GCGCAGGTTT CTGATGGCCA CGACATGGAC CATTATGCAG CTGATGCCTT CGCGGTCGTT
GAAGCCCTCG ACCTCAAGAA CGCCGTCCAT ATCGGTCACT CCACCGGCGG AGGAGAAGTC
GCCCGGTATG TGGCCATGCA TGGCCAGCCA GCCGGTCGCG TCGCCAAGGC GGTTCTGGTG
TCTGCCGTCC CGCCGCTGAT GCTGAAGACT GACGCCAATC CCGAAGGCCT GCCGATGGAA
GTTTTCGACG GTTTCCGCTC AGCGCTGGCT GCCAACCGCG CGCAGTTCTT CCGCGACGTT
CCCGCCGGTC CATTCTATGG CTTCAACCGT GACGACGCCA AAGTCCAGGA GGGCGTGATC
CAGAATTGGT GGCGTCAGGG TATGATGGGC GGCGCGAAGG CGCATTACGA CGGCATCAAG
GCTTTCTCTG AAACCGACCA GACCGAGGAT CTGAAGACGA TAACCGTCCC AACTCTCGTC
CTGCATGGCG AAGACGACCA GATCGTGCCC ATCGCCGATG CAGCACTGAA AGCTATCAAG
CTGCTGAAGA ATGGTACGCT CAAGACCTAT CCCGGCTTCT CGCACGGTAT GCTGACCGTC
AATGCCGATG TGCTCAACGC CGACCTGCTG GCTTTCGTGA AGTCCTGA
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| Protein sequence | MHNRKSRRVR VNHRDAVVAE TLSIISIIAI KSQLIMQLLA RVFGGNMPSS DKPSGLTTQK
QTRPQDANMT DTTLLSLTRR GVLLSGSAVA ATALTASFSF AAKLAASTNT STEGNKTMGT
ITTKDGVEIF YKDWGSKDAQ PIVFHHGWPL SSDDWDAQML FFLANGYRVI AHDRRGHGRS
AQVSDGHDMD HYAADAFAVV EALDLKNAVH IGHSTGGGEV ARYVAMHGQP AGRVAKAVLV
SAVPPLMLKT DANPEGLPME VFDGFRSALA ANRAQFFRDV PAGPFYGFNR DDAKVQEGVI
QNWWRQGMMG GAKAHYDGIK AFSETDQTED LKTITVPTLV LHGEDDQIVP IADAALKAIK
LLKNGTLKTY PGFSHGMLTV NADVLNADLL AFVKS
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