| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5107 |
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| Symbol | |
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| ID | 7380913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 93950 |
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| End bp | 96148 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643648766 |
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| Product | dehydrogenase |
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| Protein accession | YP_002547003 |
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| Protein GI | 222106212 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTCG ATACACCTGC AACAACCAAT CCAATCGACC GCCTCAAGGT CGTCGGTCAG
CCGATTCACC GCATCGATGG TCAATTGAAG ACAACCGGCC GGGCGATGTA TGCCTATGAG
TGGCGTGATC CGAACACGCG TTATGCCTAT GGCTACCCGG TTGGGGCAGC GATTGCCAAA
GGCCGGATCA AAGCCATGGA TGTGACTGCA GCCAGGAAAG CTGATGGCGT GATTTCTGTG
GTGACAACTC TGGATGTCGG TAAGCGCGAG AAGGGCAAGT TCAATACTGC AAACCTGTTC
GGTGGCGATG ACGTTCAGCA TTATCATCAG GCAATTGCCG TCGTGGTCGC GGAGACTTTC
GAGCAGGCGC GGGCTGCTGC GGCCCTGGTC AAAGTGGACT ATGACGAGGA GAAAGGGACA
TTTGATCTCA GTGCGGCGCG AGAGACGGCG AAAAAGCCGG ATGATTCCCA GAAGCCCGAC
ACGGCAGTCG GCGATTTTGA AACAGCTTTC CGAACTGCTC CAGTCACCAT CGAGCAATCC
TATACGACGC CTGACCAATC TCATGCGATG ATGGAACCGC ATGCTTCGAT CGCCGCTTGG
GATGGTGACG AGGTGACCGT GTGGACATCC AGCCAGATGA TCGATTGGTG GCGCTCCGAT
CTCGCCACAA CCCTCGGCGT TGACAAGGAG AAGATCCACT TGATGTCGCC GTTTATCGGC
GGCGGATTCG GCGGCAAGCT GTTTCTCCGG GCCGACGCTG TCTTGGCCGC CTTCGCGGCA
AGGGCGGCGA AACGACCTGT CAAAGTCGCC CTGCCGCGTC CATTGGTGAT CAATAACACC
ACCCACCGTC CGGCAACGAT CCAGCGTATC CGCATCGGCG CTGAGCGGGA CGGAAAGATC
ACCGCCATCG CGCATGAGAG CTGGTCAGGC GATCTTGCCG GAGGCGGTCC TGAGGTGGCG
GTCAATCAAA CGCGGCTTCT TTATGCCGGC GCAAACCGGA TGACGGCCAT GCGTCTTGCG
ACCCTCGATC TTCCAGAGGG CAACGCCATG CGCGCTCCGG GCGAGGCGCC CGGCTTGATG
GCGCTGGAAA TTGCCATGGA TGAAATGGCC GAAAAGGTTG GCATGGACCC GATCGCGTTT
CGCATCGCCA ATGACACTCA GGTCGACCCG GAAAATCCCG AGCGCCCATT CTCGCATCGT
GACCTGATCG GCTGTCTGAA GCGGGGTGCC GATCGCTTTG GTTGGGATAA TCGACCGAAG
GCCGGATCCC GCAGGCAGGG CAATTGGCTG ATCGGCATGG GCGTCGCCGC CGCGTTCCGC
GACAACATGG TCCTTCCTTC CGGCGCTCGG GTCAAACTCG ATAACCAGGG CGTTGTTACA
GTTGAGACCG ACATGACCGA TATCGGAACC GGCAGTTACA CGATCATCGC CCAGACCGCC
GCGGAAATGA TGGGCATTGG TGTCGATAAA GTCGCCGTGC ATCTCGGAGA CTCTCGGTTC
CCGATTTCGG CGGGTTCTGG TGGCCAGTTC GGGGCCAATT CGGCGACATC GGGCGTCTAT
GCGGCTTGCG TCAAGCTTCG TGAGGCGATC ACCCAAAAAC TTGGGTTCAA TTCCGATGAT
ATTGTCTTCG AGGATGGTGT CGTCAAAGCT GGAAACCGGT CGGTTTTCCT TGCCGAGGCC
GCTGGCCCTG ACGGTTTGGT CGGCGAAGAT ACGATGGAGT GGGGCGATCT CACCAAGACG
CATCAGCAAT CCACCTTCGG TGCGCATTTT GTCGAGGTTG GCGTCGATGT CGCCACTGGC
GAAACACGCA TTCGGCGCAT GTTGGCGGTG TGCGCGGCTG GTCGTATCCT CAATCCGATT
ACGGCGCGCA GTCAGGTGAT CGGCGCAATG ACCATGGGAG CCGGAGGCGC CCTGTCGGAA
GAACTGGTGG TCGATGCAAA GCGAGGCTTT TTCGTCAATC ACGACCTTGC CGGATACGAG
GTTCCGGTTC ATGCGGACAT TCCGCATCAG GAGGTTATCT TCATGGACGA GACTGATCCG
ATGTCATCGC CGATGAAGGC AAAGGGTATC GGGGAACTCG GGCTCTGTGG TGTCTCTGCG
GCAATCGCCA ATGCCATCTA CAACGCGACG GGCGTTCGGG TGCGGCACTA TCCGATCACG
CTCGATAAAC TGATAGGTGG CTTGCCTGAC ATTGCCTGA
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| Protein sequence | MKFDTPATTN PIDRLKVVGQ PIHRIDGQLK TTGRAMYAYE WRDPNTRYAY GYPVGAAIAK
GRIKAMDVTA ARKADGVISV VTTLDVGKRE KGKFNTANLF GGDDVQHYHQ AIAVVVAETF
EQARAAAALV KVDYDEEKGT FDLSAARETA KKPDDSQKPD TAVGDFETAF RTAPVTIEQS
YTTPDQSHAM MEPHASIAAW DGDEVTVWTS SQMIDWWRSD LATTLGVDKE KIHLMSPFIG
GGFGGKLFLR ADAVLAAFAA RAAKRPVKVA LPRPLVINNT THRPATIQRI RIGAERDGKI
TAIAHESWSG DLAGGGPEVA VNQTRLLYAG ANRMTAMRLA TLDLPEGNAM RAPGEAPGLM
ALEIAMDEMA EKVGMDPIAF RIANDTQVDP ENPERPFSHR DLIGCLKRGA DRFGWDNRPK
AGSRRQGNWL IGMGVAAAFR DNMVLPSGAR VKLDNQGVVT VETDMTDIGT GSYTIIAQTA
AEMMGIGVDK VAVHLGDSRF PISAGSGGQF GANSATSGVY AACVKLREAI TQKLGFNSDD
IVFEDGVVKA GNRSVFLAEA AGPDGLVGED TMEWGDLTKT HQQSTFGAHF VEVGVDVATG
ETRIRRMLAV CAAGRILNPI TARSQVIGAM TMGAGGALSE ELVVDAKRGF FVNHDLAGYE
VPVHADIPHQ EVIFMDETDP MSSPMKAKGI GELGLCGVSA AIANAIYNAT GVRVRHYPIT
LDKLIGGLPD IA
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