| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5094 |
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| Symbol | selA |
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| ID | 7380906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 85879 |
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| End bp | 87075 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643648759 |
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| Product | L-seryl-tRNA(ser) selenium transferase |
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| Protein accession | YP_002546996 |
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| Protein GI | 222106205 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
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| TIGRFAM ID | [TIGR01437] uncharacterized pyridoxal phosphate-dependent enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAACG ATATTCGCAC CCAGCTCGGC CTTCGCCCGG TGATCAATGT TTCGGGCACC
ATGACCAGCC TCGGCGCATC CATTGTGGTG CCAGAGGCCA TTGCCGCCAT GACAGCGATT
CTGCCGCAAT TTGTGGAAAT CAGTGATCTT CAGCGCAAAG CCAGCGCCAT TATTGCGCGG
CTAACCGGGG CTGAAGCAGG CTTTATCACC GCGTCTTGCT CGGCGGGTAT CAGCCTTGCC
GTGGCAGGTA CCATTACCGG GCCAGATCTG CTGGCCATTG AAAAACTGCC GGATGTCAGC
ACGACGAAGA ATGAAGTCCT CGTGCAAATG GGCCACCTCG TTAGCTACGG TGCGCCGGTG
GATCAATCCA TCCGTCTGGG CGGTGGCAAG GTGGTGTTGG TGGGGCAGGC AACATCTGCG
CATCGCTACC ATATGGAAAA TGCCATTACC GAAAACACCG CCGCTGCCGT CTATGTCGTT
TCTCACCATG TGGTGCATTA CGGCCTTCTG CACCTGAAAG AGTTTGTCGA GATCGCCCAT
GCGCGCGGCG TGCCCGTGAT TGTCGATGCC GCATCGGAAT ATGACCTGCG GACCTTCCTC
GATCAGGGCG CGGATATTGC TCTCTATTCC GGCCATAAAT TCCTCGGCGG CCCCACATCG
GGCATTGTTG CCGGGCGCAA GGAACTGGTG CGCAATGCCT ATTTGCAAAA CATGGGCATT
GGCCGTGGCA TGAAAGTCGG CAAGGAAAGC GTCTTTGGCG TCATGGCAGC GCTGGAAGCC
TGGGAAAAGC GCGACCACGC GAGCGTGCGC GCCACTGAAA TCGGCTATCT GCATCTGTGG
AAAGACGCAC TCGATGGCCG CCCCGGTGTA ACGGCGCTGA TTGAGCCAGA CCCAACCCAC
AATCCGCTGG ATCGCCTGCG GGTGATCCTC TCACCGCAAG AAGCGCATAT CAGCGCCTAT
GATCTGGCAG GCGCGCTGGC CCGTGGCAAT CCGCCGATCA TCGTTCGCGA CCATGAGGCA
GAACATCATT ATTTCTATCT CGATCCTTGC AATCTTCATC CGGGCCAAGA GGTCATCGTG
CGTGACCGTC TGGTGGAAGA ACTCGACAAG GCGAGAGCCT CCAATGAAGT GATCAACACA
CCCCATGAAG AATGGGGCCG CCATCGCTTC GATTCCATGC TGCGTTGGCC GGATTGA
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| Protein sequence | MTNDIRTQLG LRPVINVSGT MTSLGASIVV PEAIAAMTAI LPQFVEISDL QRKASAIIAR
LTGAEAGFIT ASCSAGISLA VAGTITGPDL LAIEKLPDVS TTKNEVLVQM GHLVSYGAPV
DQSIRLGGGK VVLVGQATSA HRYHMENAIT ENTAAAVYVV SHHVVHYGLL HLKEFVEIAH
ARGVPVIVDA ASEYDLRTFL DQGADIALYS GHKFLGGPTS GIVAGRKELV RNAYLQNMGI
GRGMKVGKES VFGVMAALEA WEKRDHASVR ATEIGYLHLW KDALDGRPGV TALIEPDPTH
NPLDRLRVIL SPQEAHISAY DLAGALARGN PPIIVRDHEA EHHYFYLDPC NLHPGQEVIV
RDRLVEELDK ARASNEVINT PHEEWGRHRF DSMLRWPD
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