| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5086 |
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| Symbol | |
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| ID | 7380899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 78435 |
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| End bp | 79988 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643648752 |
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| Product | ABC transporter substrate binding protein (dipeptide) |
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| Protein accession | YP_002546989 |
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| Protein GI | 222106198 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.243076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGAACG TCATGAAATC TAAATTGGGA TTGCTGGCAA AGCTGGCATT TGCACTTTTA
CCAGGGCTCG CACTTCTGCC GGGGCATGGT CTCGCGCAGG ACAAGGGCGG GGTCATCAAC
GTCGCAACCA TCGGTGAGCC GCCAACACTG GACCCGATGG CGTCAACTGC TGATCTGGTC
GGTATGACCA CACAGCATAT TTTCGAGACC TTGTTTACGT TCGACGACAA ATGGAATGTC
ATTCCGCTGT TGGCTGAGGC CATGCCCACG ATTACCGATG AGGGCAAAAC CTACGACATC
ACCTTGCGCT CGGGCGTGAA GTTTCATGAT GGCTCGGTGA TGACATCCGC TGACGTGGTG
GCCTCGATTG AGCGTTGGCT TGCAACCGCA TCACGCGGCA AACAGGTTGT GGCCTATATC
GACAAGGTAA CAGCTGAGGG CGACAATGCC ATTCGCATCA CGCTGAAAAA GCCCTATGCG
CCGCTGTTGT CGCTGCTGGC GTTCAACAAT TCCGCAGCCG TGATTATTCC AAAATCCACC
ATTGCCGATA CTTTGACGAA ATTCATCGGC ACCGGCCCCT ATATGCTGAA AGAGCGCAAG
CCAGACCAAT ATATTCAGCT GGTGCGGTTT GATGGTTATA CACCCAGAAC CGATGCCGCA
AACGGCTTTG GCGGTGCGCG CAAAGCCATT CTGGATGAAA TCCGCTTTAT TCCCGTGCCG
GATGCCAACA CGCGGCTTGA GGGCGCTGTC TCCGGTCAGT TTGACTACAC GGATTCTCTC
GCACCCGAGA GCTATGACCG CCTGAAAGGC TCAAAAGCCT CTGATCCCGT GGTGCTGAAA
CCCTACGGTG CGCCAGTGTT TGTGATGAAC ACCAAACAGG GCATCATGAC CAGCAAGACC
TTGCGTCATG CCGTGCAGGT GGCATTGAAC CCGCAGGACA TGCTGCTGGC CGCCTTTGGC
AACCCGGAAT TCTTTGCCGT TGATGGAGCA CTTTATCCTG AAGGCTATGC CTGGCACACT
AAGGAAGGCA TTGCCCGTTA CGGCAGTGGC GACCCTGAAG CCGCCGCCAA GTTGATGAAA
GAGGCGGGCT ATGACGGCAA GCCGGTGCGC ATTCTCACCA GCCGACAGTA TGAGTTTCAT
TACAAAATGG CGCAGGTGGC AGCGGAATAT CTGAAAGCCG CTGGCTTCAA GGTTGATCTG
CAAATCTATG ACTGGGCAAC CCTGACAACG CGCCGTGCTG ATCCGGCCCT TTGGGATATT
TTCATCACCC ACGGCCCCTT CCCGCCAGAG CCTGTGCTGA ACGGCTGGAT GTCGGACAGT
TATCCCGGTT GGTGGTCAAC GCCAGAAAAG ACCAAGGCGA TTGAGCCATT CATTGCAGAA
TCTGATCCCG CCAAGCGCCA GAAGCTTTTC ACGGAGATTC AGAAGACCTT CTATGAGGAT
GCGCCTGTGT TCAAGGTGGG TGATTTCAAT GCGCTCTCGG CCAAGGCCAA GACGCTTGAG
GGCTTTCATC CATCGCCATG GCCTTACTTC TGGAATGTCA GCTCCAAAAA GTAA
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| Protein sequence | MGNVMKSKLG LLAKLAFALL PGLALLPGHG LAQDKGGVIN VATIGEPPTL DPMASTADLV
GMTTQHIFET LFTFDDKWNV IPLLAEAMPT ITDEGKTYDI TLRSGVKFHD GSVMTSADVV
ASIERWLATA SRGKQVVAYI DKVTAEGDNA IRITLKKPYA PLLSLLAFNN SAAVIIPKST
IADTLTKFIG TGPYMLKERK PDQYIQLVRF DGYTPRTDAA NGFGGARKAI LDEIRFIPVP
DANTRLEGAV SGQFDYTDSL APESYDRLKG SKASDPVVLK PYGAPVFVMN TKQGIMTSKT
LRHAVQVALN PQDMLLAAFG NPEFFAVDGA LYPEGYAWHT KEGIARYGSG DPEAAAKLMK
EAGYDGKPVR ILTSRQYEFH YKMAQVAAEY LKAAGFKVDL QIYDWATLTT RRADPALWDI
FITHGPFPPE PVLNGWMSDS YPGWWSTPEK TKAIEPFIAE SDPAKRQKLF TEIQKTFYED
APVFKVGDFN ALSAKAKTLE GFHPSPWPYF WNVSSKK
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