| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5082 |
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| Symbol | |
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| ID | 7381235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 75500 |
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| End bp | 76354 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643648749 |
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| Product | 2-hydroxyhepta-24-diene-1 |
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| Protein accession | YP_002546986 |
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| Protein GI | 222106195 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0590578 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTGG CAAGATTTAT TGTCGAGGGA AAGCCTCGGC TCGGTAAAGT CGTGGGCTCT
GAAATCATTG ATCTGAGTTC CGTGGCTCGT GAATGCGGAA GCTCAATGAA GGCGCTGATT
GAGCGGTTGG ATGAATTGAG ACCGGCTTTG GAAGCGCTTG ATAGCCCTTC TTTTGTGCTG
GCTGATGTTC AGCTTGCTGC ACCAATCACG GATCCCAGGA AGTTTCTCGC CATCGGAATG
AATTACAGGG CCCATGCCGA GGAAGCGGCG GCTGCAGGAA TACCGACGCC AAAGTCACAA
TTGTGGTTCA ACAAACAGGT CACTTGCATC AATGGACCCT ATGACGACGT GGTGCTGCCC
AGCGTGTCCG AAAAGGTCGA TTACGAAGCT GAACTGGGTT TCATCATTGG CAAGCGGTGC
CGTCATGTGA AGCGCGAAGA CGCGCAATCG GTGATCGCCG GGTATTTCGT TGCCAATGAT
GTCACCGCCA GAGACTGGCA GTTCCGTTCA CCGACCTATA CGCTCGGCAA GAGCTTTGAT
ACCCACGGCC CCATCGGCCC CTGGATCACG ACGGCGGATG AAGTTCCGGA TCCGCACAAT
TTGACGCTAT CCCTCTCTCT GAATGGCGAG GAAAGACAGC GCACGTCTAC GGGCGATATG
ATCTACGATA TCTGGGATCA GATTTCCTAT CTCTCAACCG TTATGACTCT CGAGCCGGGT
GACATCATCA TAACCGGAAC ACCGTCCAAT GTCGGGATTG CAACCGATAC CTTCATGAAG
CCGGGCGACG TCGTTCGCGT CGAAGTAAAC GGGCTGGGTT CAATCGAAAA CCGGTTCGTT
GCCGAAGAGC GATAA
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| Protein sequence | MKLARFIVEG KPRLGKVVGS EIIDLSSVAR ECGSSMKALI ERLDELRPAL EALDSPSFVL
ADVQLAAPIT DPRKFLAIGM NYRAHAEEAA AAGIPTPKSQ LWFNKQVTCI NGPYDDVVLP
SVSEKVDYEA ELGFIIGKRC RHVKREDAQS VIAGYFVAND VTARDWQFRS PTYTLGKSFD
THGPIGPWIT TADEVPDPHN LTLSLSLNGE ERQRTSTGDM IYDIWDQISY LSTVMTLEPG
DIIITGTPSN VGIATDTFMK PGDVVRVEVN GLGSIENRFV AEER
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