| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5074 |
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| Symbol | |
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| ID | 7381228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 66801 |
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| End bp | 68207 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643648742 |
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| Product | oxidoreductase |
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| Protein accession | YP_002546979 |
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| Protein GI | 222106188 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.207548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCTC TTTCTAGTGA CTTGTCGCTT ATGCCCGGCC TGCCGCCCGC GCCCAGTGGG
CAGCCCGCTC CAGGCATGCC ACCCATGCCC GGTTTGCCGC CTATGTCTGG CCTTCCCCCA
ATGCCGCCTG CAGTGCCTTC AGCGCCTGTC GAGTCGAAAT GGTTGACCGA TAAGGGTCGT
GATATCCGCG ATAAGGCCCG GGCGCTTATT CCCCTTATTC GGGAGCAGGC GCGCGAAGGC
GAGAAGATTG GCGCCTTGAC GCCGGATGTT CTCAAGGCGC TCAGCGATAT CGGTATCTAC
AAGATGGCCA TGCCTGCTGA ATGGGGCGGA TATGCCCTTG GTGCGCGGGA TCTGGTCGAG
ATTATCGCCA CGCTGGGTGA GGCGGATGGA TCGGCTGGCT GGGCTGGTTT CGTCGCCGTT
GGAGTGAAGA ACCTGCTGGC CCTTGATGGC GAGGTTGTCG GAGAAGTTCT TGAAGATACC
CGAGGTTGGG CTGGCCCTAC CGTTGTCGGT GCGTCCGTTT TTGCGACAAA AGTCGGAGAA
GGTCGCAAAG TCGAAGGTGG CTGGATGGTC AAGGGTCGCT GGGCTTTCGG TAGCGGATGC
AAGCACGCCA AATGGGCGAT GCTGGGCATA GAATATGATC CGAAGGTTGC TGGTGGTACC
GGGCGCGGCG TTGTTGTCGT TGACCGTTCG AAATATGAGA TTTTGGACGA CTGGCACGTC
ATGGGCTTGT CTGGCAGTGC CAGCAACAGC CTTGCCATCA AGGAAGAAGT CTTTGTGCCC
GATCGTCGGT TTCTCGATCT GAGCCAATAC CCTCTGCGCT TCCAGCAATT GCATACGCGA
TACCAGGGCT TTGGATATCA GCAGCGCGGG CTTGCCAATC TGGCGACCGT ATCCTTGTGT
GATATGTCGA TTGCGCTCGG TATGGCGCGT GGGGCACTTT CGTGTTTCGC GGAGCAGGCC
AAGAAGCGTC CGCCTTTTTC ACTCCCGTAT CCGACAATCT CGGACATGGC GTCGGCGCAA
GTTGCTGCCG GCAAGGCACT TGCCATGATC AAGGTCGCCC AGGCGACAAT CGAGAGCTAC
GCAGATCAGG TCGATGCCAG GACAGCGGAG GGCCAAGACT TTACACATGA CGAGGACTCA
GAGATCAGTT TGACCCTCGC TTACGTTGCA AGCCTTTGCG AAGACGCCAT TAACCTGTTG
CAGAAGACGT TGGGTTCATC GACGATGTCG CTCAACAACC CTATCCAACG CTTTGTTCGC
GACGTTCGTG TGCTGGCATC CCACGGCGCC GTACGGCTTG ATCCGCAAGC GGAGGTGAAT
GGTCGGCGCC TCCTGGGCAT CACACCTTTC CCAATGTTTG CCGGTGCCGT GCCAGAACGC
GTTAATCTGG AAGGCAAGGG GTTGTAA
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| Protein sequence | MSALSSDLSL MPGLPPAPSG QPAPGMPPMP GLPPMSGLPP MPPAVPSAPV ESKWLTDKGR
DIRDKARALI PLIREQAREG EKIGALTPDV LKALSDIGIY KMAMPAEWGG YALGARDLVE
IIATLGEADG SAGWAGFVAV GVKNLLALDG EVVGEVLEDT RGWAGPTVVG ASVFATKVGE
GRKVEGGWMV KGRWAFGSGC KHAKWAMLGI EYDPKVAGGT GRGVVVVDRS KYEILDDWHV
MGLSGSASNS LAIKEEVFVP DRRFLDLSQY PLRFQQLHTR YQGFGYQQRG LANLATVSLC
DMSIALGMAR GALSCFAEQA KKRPPFSLPY PTISDMASAQ VAAGKALAMI KVAQATIESY
ADQVDARTAE GQDFTHDEDS EISLTLAYVA SLCEDAINLL QKTLGSSTMS LNNPIQRFVR
DVRVLASHGA VRLDPQAEVN GRRLLGITPF PMFAGAVPER VNLEGKGL
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