| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5072 |
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| Symbol | |
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| ID | 7381226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 63703 |
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| End bp | 65487 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643648740 |
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| Product | hypothetical protein |
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| Protein accession | YP_002546977 |
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| Protein GI | 222106186 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAAAACA ATACGAGTGC GACTTCGATC ATCTGCGTAT CATCTCATGA CGCTGCGCCA
AGTGTGGGCA CGGCAGACAC AGAATTGGCA AGCCCGACAC CGGGACAGAT ACGCGACGCG
CTGGATCAAC TCTGCAACGG CAATACATTC GCAACGGCAA AGCGCTCCCG ACAGTTGCTA
CAGTATCTTG TCGAGGAGGC GCTCGCGGGT CGCGCGAATG CCATTGGCGA ACATGCGATC
GCTCAGGACG TATTCGGCAA AGATGAGCAT TTCGATCCGC GGATCGATAC ATGTGTCCGG
ACCGAAGCCT GGCGTCTTCG CAACAGATTG CAAAGCTATT ACGAACATGA GGGACGCTTC
GATGTCGTGA GGGTGGCGTT CATGCCCCGC TCACTCGTGC CAATCTTCTC CTCGCAGCCA
TCCTTGCCCG CGGCGGATAT AAAAGATTTT CCGCGCCGGA TTGGCATTCA TATGGACTGC
GAACCCGATG CCGGCGGGAA CGAACAGCAC TTGGCGCGAC GGCTACCCGA AGAGATTGCC
AGCAGCCTTT TCAAGCTTTC TTCGATAGTC CCGGTTCTTC CTGGCGGAGC GAGTAGATCA
GAGCTGGAGT TACGGTGCGC CATTCGCTCC GATGAGCAAT GGATCAGGAT CGTGACGACA
ATGGTCGATC TGGATGGCTT GGTTCAAGGA AGTAAAACCT TTTCTTTCTC ACGCAATACC
GCGAAACCCT CTCCCACCTT GATAGCCAAT GCCATCGGCG AAATGGTTTC AGATTCGCTG
TCACGCAACA TCCTGGGTCA GGCGGTGAAC ATACCATGCC ATTCTGACGA GAACGAGAAC
CGGTTTCTTG ACCAGCTTCT GCGCGGTTCC CACATCAACC GGCGTGAGCG GTTGATCGAG
CTGCGCGCCG CCGTCTTGCG CTATGAACAA ATCATCTCCG ACGACCCCTT GGATCAATTG
TCTCACCGGA GGCTTATTGG CGCTTTAGGA CAGTTTTTAT CGCTTGCGCC GGGCTCGATA
TCCAGGGTGA TGCCCAAGCT GGCCGCCTCT GCCCACAGCG CTTTGTCGCT GAATGGCAAC
CTCAGCGACG TCTGGCTGAT CTTGGGTTGG GCGTCGAGCT ACGCCTATGA CTGGCCACAG
ACCGAAGGCG CATGCCGCCA GGCCATTGCC ATCACCCCGC TCGACCCTTC GCCCTACATA
TTGCTTGCGT TGACCTATCT GCAAAGTGGA CAGATCGTTT CTGCGCTGCA AATAGCGGAG
GAAGCGATCA ATCTCGATCC TTATTCCCCC ATGGTGGCCA ATGTTTATGC GCTAACGCTG
AATGCAGCCC GCCGTTTCAG GGAGGCAGCG AAAGTCGCAC GCGACGCCCT TGATGCCGAA
CCCGGATTTG TTAAGTTACG GCTTACCTAT GGAGAAGCCA AGCTCAACAT GGGTCAGATT
GATAGCGCTA TCGAAGAATT TACTGCCGCC TCACGCATCA TGACCGAAGA TGCCACGGCC
TGTGGGCTGC TAGGACTAGC CTATGGGCTT TCAGGCGAAA GATCAGAGGC GGATCGTCTT
CTTTCCAGGG TGAAGCAGTC ACCAAATCTG CGAGGCCAAG CTGTGCATGC GGAGGCGATG
ATCCATCTCG GACTAGGCGC TCGCGATGAA GCCATTAGCG CTTTGGAGCT GGCGGTGACA
CGAAGAGGCA CACCAGGGCT GTTTCTGGCA AATGCCGTTT TCGATCCCAT TCGGGATGAC
AGCCGCTTTT CAAGAATTCA ACATCAGATG GAGCTGGCAC ATTAG
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| Protein sequence | MENNTSATSI ICVSSHDAAP SVGTADTELA SPTPGQIRDA LDQLCNGNTF ATAKRSRQLL
QYLVEEALAG RANAIGEHAI AQDVFGKDEH FDPRIDTCVR TEAWRLRNRL QSYYEHEGRF
DVVRVAFMPR SLVPIFSSQP SLPAADIKDF PRRIGIHMDC EPDAGGNEQH LARRLPEEIA
SSLFKLSSIV PVLPGGASRS ELELRCAIRS DEQWIRIVTT MVDLDGLVQG SKTFSFSRNT
AKPSPTLIAN AIGEMVSDSL SRNILGQAVN IPCHSDENEN RFLDQLLRGS HINRRERLIE
LRAAVLRYEQ IISDDPLDQL SHRRLIGALG QFLSLAPGSI SRVMPKLAAS AHSALSLNGN
LSDVWLILGW ASSYAYDWPQ TEGACRQAIA ITPLDPSPYI LLALTYLQSG QIVSALQIAE
EAINLDPYSP MVANVYALTL NAARRFREAA KVARDALDAE PGFVKLRLTY GEAKLNMGQI
DSAIEEFTAA SRIMTEDATA CGLLGLAYGL SGERSEADRL LSRVKQSPNL RGQAVHAEAM
IHLGLGARDE AISALELAVT RRGTPGLFLA NAVFDPIRDD SRFSRIQHQM ELAH
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