| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5066 |
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| Symbol | cfa |
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| ID | 7381222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 58678 |
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| End bp | 59781 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643648736 |
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| Product | cyclopropane-fatty-acyl-phospholipid synthase |
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| Protein accession | YP_002546973 |
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| Protein GI | 222106182 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2230] Cyclopropane fatty acid synthase and related methyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTCAATC CCGAGCTTGC GCTTGGCGAA GCGTTTATGG ATGGCAAGTT GGGCATTGAG
CAAGGCACCA TCTATGAACT GCTTGAACTG GTATTTCAGA ACACGGGCGT GGATCGCCTG
ACGGGCATCG CTCGATTTAT GCGGCGTTTC ACACGCTTGA AACGGCGTAT TCAGCAGTAT
AATCCGGTCG GGCGATCAAA GCGCAACGTG GCGCATCATT ACGACCTTGA TGGCTCGCTC
TATCGGTTAT TTCTCGATTC CGACAGTCAG TATTCCTGTG CTTATTTCGA GGGGCGGGGC
AGTTCGCTGG AAGAAGCACA GCTTGCCAAA AAACGGCATC TGGCTGCCAA GCTGCTGATC
GAGCCGGAGC ATCGTGTTCT TGATATCGGA TCAGGATGGG GTGGACTTGG GCTCTATCTG
TCCGAGATGA CCCAGGCGGA CGTCACCGGC GTTACGTTGT CGCAACATCA GCATGCAATT
TCGAATGGTC GTGCCAAGGA CATTGCATCC TCGCGTCGGC CTCGATTTTT GCTGCAAGAT
TATCGGGATA TCAAGCAACA ATTCGACCGG ATTGTTTCCG TCGGCATGTT CGAACATGTC
GGGATTGGTC ATTTCGATGA ATTTTTTGCA AAAATACGGG CTTTGCTCAA GCCTGACGGG
TTGATGCTGC TGCATTCCAT CGGCGTGTTC GATGGGCCCT CTCATACCAA TCCCTGGATA
CAGAAATACA TCTTTCCAGG CGGCTACATT CCATCTCTTT CAGAAGTGCT GGCGGCAATC
GAACGGCAGG GGCTGGTGGT CTGCGATATC GAGATATTGC GCCTTCACTA TGCCGAGACC
TTGAAAGCTT GGCGCGAGCG GTTCCTAGCC CGGCGGGACG AAGCGGTGGC TCTTTATGAC
GAGCGGTTCG CCCGCATGTG GGAATTCTAT CTGGCGTCAT CGGAGACCGC ATTTCGGTAT
CAGGGGATGA TGGTTTTTCA AATTCAGCTG GCGCGCGATC AGTCCGCGGC TCCTCTGCGG
CGCGATTATA TTCATGCCGC CGAAAGCCGC CTGCGGGAGC TGGAGATCTG CAAGCCCGTT
CCCTTAAGCC GTGTCGCCGA ATAG
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| Protein sequence | MFNPELALGE AFMDGKLGIE QGTIYELLEL VFQNTGVDRL TGIARFMRRF TRLKRRIQQY
NPVGRSKRNV AHHYDLDGSL YRLFLDSDSQ YSCAYFEGRG SSLEEAQLAK KRHLAAKLLI
EPEHRVLDIG SGWGGLGLYL SEMTQADVTG VTLSQHQHAI SNGRAKDIAS SRRPRFLLQD
YRDIKQQFDR IVSVGMFEHV GIGHFDEFFA KIRALLKPDG LMLLHSIGVF DGPSHTNPWI
QKYIFPGGYI PSLSEVLAAI ERQGLVVCDI EILRLHYAET LKAWRERFLA RRDEAVALYD
ERFARMWEFY LASSETAFRY QGMMVFQIQL ARDQSAAPLR RDYIHAAESR LRELEICKPV
PLSRVAE
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