Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5064 |
Symbol | |
ID | 7381221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | + |
Start bp | 57596 |
End bp | 57991 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643648735 |
Product | hypothetical protein |
Protein accession | YP_002546972 |
Protein GI | 222106181 |
COG category | [S] Function unknown |
COG ID | [COG4922] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.639568 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAAG ATCGCGCCGC TGCCAACAAA CGCCTGGTGC TCGACTTCTT CCGCTGTGTC TTCGAGGCGC GTAACCCGGA TGCCGCGCGC GATTTCGTTA CCGAGGATTA TATCCAGCAC ACCGACCAAC TTCCGAGTGG CCTAGCCGCT CTGGAAGCGT TTGTTCGCAC CATTTTTCCT GACGGCCCGG TACCGACGCC CCCACAACTC CAACATCCGC CGGAATTTAT CGTCGCGGAA GGCGACATGG TGGTTCTTTC CGCCGTCATG CCTCAGCCCG ATCCCGAGCA CCCGGGTGAG ATGTGTCTGC GGTATGTTTT CAACGCGTTC CGCATCTCCA ATGGAAAGCT CGCCGAGCAT TGGGGAAGCG CCGGTAAGGT GTATCGATCC GCGTAA
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Protein sequence | MSEDRAAANK RLVLDFFRCV FEARNPDAAR DFVTEDYIQH TDQLPSGLAA LEAFVRTIFP DGPVPTPPQL QHPPEFIVAE GDMVVLSAVM PQPDPEHPGE MCLRYVFNAF RISNGKLAEH WGSAGKVYRS A
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