Gene Avi_5063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_5063 
Symbol 
ID7381220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011988 
Strand+ 
Start bp56881 
End bp57480 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content58% 
IMG OID643648734 
ProductNAD(P)H-flavin oxidoreductase 
Protein accessionYP_002546971 
Protein GI222106180 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.772676 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCCATTT CTTCAAATAA TCGCTCTTCG GATTACGATA TCGATCCGAT TTTCCTGGAT 
CGCTGGTCTC CTCGGGCGCT TGATCCCCAG GCAATGTCAG AGGAAGATCT GATGACGATT 
TTGGAGGCGG CTCGTTGGGC GCCGTCTTCA TTCAATGCCC AGCCCTGGAG ATTCATTTAC 
GCGCAGCGCG ATACGCCGGA ATGGCAGAAT ATTTTCGGTC TGCTCGCGCC GATGAACCAG 
GCGTGGGCAT CGCGTGCTTC GGTATTGGTG GTGATTATTT CCGCAAATAC AGCCATCATG 
CCGATGCAGA CCGAGCCAGT TCCCTCTTAC AGCCATTCCT TCGACGCCGG CGCTGCCTGG 
GCCTATCTTG CACTGCAAGC AACGCGCCTC GGCTGGTATG CGCATGGCAT GGCTGGGTTC 
GACGTTCCAC GCAGCTACGA AGTGCTTGGG GTCCCGGAGA GCTTTCGGGT TGAAGCCGTC 
ATCGCGATCG GGAGGATCGG GGACAAGAGC TTGTTGCCGC CGCCCCTGCA GGAGCGCGAG 
CAGCCAAACG GGCGCCGTCC GCTCCAGGAG TCGGCTATGA AAGGACGTTT CATCGGCTGA
 
Protein sequence
MSISSNNRSS DYDIDPIFLD RWSPRALDPQ AMSEEDLMTI LEAARWAPSS FNAQPWRFIY 
AQRDTPEWQN IFGLLAPMNQ AWASRASVLV VIISANTAIM PMQTEPVPSY SHSFDAGAAW 
AYLALQATRL GWYAHGMAGF DVPRSYEVLG VPESFRVEAV IAIGRIGDKS LLPPPLQERE 
QPNGRRPLQE SAMKGRFIG