| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5060 |
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| Symbol | |
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| ID | 7381217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 53069 |
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| End bp | 54052 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643648731 |
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| Product | ABC transporter substrate-binding protein |
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| Protein accession | YP_002546968 |
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| Protein GI | 222106177 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCGCCA TTGCCCTTGC TTTGGGATTG GCCTGTCCAA GCCAGGCAGA GGAGAAAACC
ACCCTGTCCA TCACCCGCCA GCCTGGGATT CTTTACCTCG CAAGCCATGT GATGGAGACG
CAGAAACTTA TCGAAAAACA AGCAGCAGCC GAAGGTCTTC AAGGCATTAC CGTCGAGTGG
CGCACCTTTA GCGGTGGCGG CGCGCAGACC GATGCGCTGC TGGCCGGCAA TGTCGACGTC
GTCAATACCG GTACCGGCAA TCTTCTGCTT CTATGGGATC GCACCCGCGG CAAGGTGAAG
GGGATCATCA CCAGTTCTGC CCAGCCGGTG ATTATGGTGT CCAACGACCC GCGCATCAAG
ACGCTGAAGG ATATCCAGGA TGGCGACAAG ATCGCCGTGC CGACTGTCGG CGTCTCCACC
CAGGCGATCC TGTTGCAAAT GGCGGCAGCC AAGCTGTATG GCGACGATCA GGTCAAGAAA
TTCGACAAGA ACACCGTGCA GCTTGGCCAT CCCGATGCGC TGGCGGCGAT CGCCAATTCG
CAACATGAGG TCAAGAACCA CTTTTCCGCG CCGCCCTTCC AATATGTCGA GTTGAAGCAG
CCGGGCGTGC ATAAAGTCAC GGATTCTCGC GAAATCATCG GGGGAGCACT GACCCAAGCG
ACCTTCTTCA CCACCACCAG TTTTGCGGAG GCAAACCCGA AACTGGTCAA GGCATTGCGG
GTCGCAACGG AAGAAGCAAT CACTTTTATC AAGAAAGATC CGAAGGCTGC ACTTGAAGCT
TACAAAACCG TGTCCGGTGA CAAGACCAGC CTTGATGACC TGATGGTCAT GATGAAGGAA
CCGGGCATGG ACGAGTGGCG CACCGATCCG CAAGGCACGA TGAAATTTGC CGAACATCTC
CATAAAGTCG GCACACTCAA ATCCATGCCG AAGGCCTGGA CCGACTATTA TCTGCCCGAA
AGCGCCTATC TTAACGGGAA TTGA
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| Protein sequence | MTAIALALGL ACPSQAEEKT TLSITRQPGI LYLASHVMET QKLIEKQAAA EGLQGITVEW
RTFSGGGAQT DALLAGNVDV VNTGTGNLLL LWDRTRGKVK GIITSSAQPV IMVSNDPRIK
TLKDIQDGDK IAVPTVGVST QAILLQMAAA KLYGDDQVKK FDKNTVQLGH PDALAAIANS
QHEVKNHFSA PPFQYVELKQ PGVHKVTDSR EIIGGALTQA TFFTTTSFAE ANPKLVKALR
VATEEAITFI KKDPKAALEA YKTVSGDKTS LDDLMVMMKE PGMDEWRTDP QGTMKFAEHL
HKVGTLKSMP KAWTDYYLPE SAYLNGN
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