Gene Avi_5059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_5059 
SymbolssuB 
ID7381216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011988 
Strand
Start bp52062 
End bp52877 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content60% 
IMG OID643648730 
ProductABC transporter nucleotide binding/ATPase protein (nitrate/sulfonates) 
Protein accessionYP_002546967 
Protein GI222106176 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCAGG CAACTGCTGC CGCCGTGCGC CTCGCGCCGG CCCCCGAAAA AGCGCCGCTT 
CTTTCCGTTG ATCGCGTTAC GCTGCGTTAC AAAACGCCCA ATCTGCTGAT TACCGCCACT
GAGGATGTCA GTTTCGATGT GCGGGAATCC GACCGCTTCG TGCTGCTCGG CCCATCCGGC
TGTGGGAAGT CGACGCTGCT GAAAGCCGTT GGCGGCTATA TGACCCCAGT ATCCGGCACG
ATCCATATCA ATGGCCGCCA AGTGAAAGCC CCCGGACCGG ACAGGATGAT GGTGTTCCAG
GAGTTCGACC AGCTGATGCC CTGGAAGACC GTGCTGGAAA ACGTGATGTT CCCGCTTCTC
GTCGCCCGTA AAATGCCCAG GCCCGAAGCC GAGGCACTGG CCCGCCATTA TATCGACAAG
GTCAAGCTGA CCCGGGCCGT CAACAGCTAC CCTCATACGC TGTCGGGCGG CATGAAGCAG
CGCGTGGCGA TTGCCCGCGG CATGGCCATG CAGCCGGATA TCCTGTTGAT GGACGAGCCT
TTCGCCGCAC TGGACGCCCT GACCCGACGG CAGATGCAGG ACGAATTGCT TCAGCTTTGG
GAAGACACCA AATTCACCGT GATCTTCGTC ACCCATTCGA TTGCTGAAGC GATCAAGATT
TCCAACCGCA TCCTGCTGCT GTCACCGCAT CCGGGGCGCG TGAAGGCCGA GGTCGTCGAT
GTCGACAAGG TGAGCCAGGC GGATGGCAGT GCCGCAGCTT TGGAGCGCGA TATCCACAAC
CTGCTGTTCT CCAACGAACC CGGTCACAAG GAATAG
 
Protein sequence
MMQATAAAVR LAPAPEKAPL LSVDRVTLRY KTPNLLITAT EDVSFDVRES DRFVLLGPSG 
CGKSTLLKAV GGYMTPVSGT IHINGRQVKA PGPDRMMVFQ EFDQLMPWKT VLENVMFPLL
VARKMPRPEA EALARHYIDK VKLTRAVNSY PHTLSGGMKQ RVAIARGMAM QPDILLMDEP
FAALDALTRR QMQDELLQLW EDTKFTVIFV THSIAEAIKI SNRILLLSPH PGRVKAEVVD
VDKVSQADGS AAALERDIHN LLFSNEPGHK E