| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5053 |
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| Symbol | vdh |
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| ID | 7381210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 44354 |
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| End bp | 45802 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643648724 |
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| Product | vanillin: NAD oxidoreductase |
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| Protein accession | YP_002546961 |
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| Protein GI | 222106170 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.207548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCACGAAA TCCAGCAAAT CATTGGTGGC AAGAAAGTCG GAGCCTTGTC GGGCAAGACC
TTCGACCGGA TCGATCCATT CAATGGCGAG ATTGCTTCCC GCGCCCCGGC CTCGAGCCTG
GACGATGTCA AGGCAGCAGT TGCCGCAGCC CAGGCGGCCT TTCCCGCCTG GTCGCGCACC
GGCCCCGGCG AAAGGCGGGC GCTGCTGCTG AAAGCCGCCG ACATCATGGC CTCGAAGGCG
GCAGACTTCA CCGCGCTGAT GATCACGGAG ACGGGTGCAA CCGGTCCCTG GGCCGGCTTC
AACACCATGC TTGCCGCTGG CGTATTGCGG GAAGCCGCCA GCATGACCAG CCAGATCCAG
GGCGAAGTCA TCCCCTCCGA CAAGCCCGGT ACATTGTCCA TGGCGGTGCG CCAGGCAGCA
GGCGTCTGCC TTGGCATTGC GCCCTGGAAC GCACCAATCA TTTTGGGCAC ACGCGCCATT
GCCATGGCAA TTGCCTGCGG CAACAGCGTC ATCCTGAAGG CATCCGAAGC CTGCCCCGGC
GTTCACGTCC TGATCGGCCA GGTGCTGGTC GAAGCTGGCC TGCCGGATGG CGTCATCAAT
GTCATCACCA ATGCGCCTGA AGATGCTGCC CAGGTGGTGG AGGCGCTGGT CAGCGCACCG
GAAGTTCGCC GCGTCAATTT CACCGGTTCC ACCAAGGTCG GACGCATTAT CGGCGAATTG
TGCGGTCGCC ACCTGAAGCC CGCCCTGCTT GAACTCGGCG GAAAAGCACC CTTTCTGGTG
CTCGAAGATG CCGATATCGA CGCTGCCGTC AATGCGGCGG TGTTTGGCTG CTACATGAAC
ATGGGCCAGA TCTGCATGTC CACGGAGCGG TTGATTGTCC ACGAAAAGGT CGCCGACGAA
TTCGTGGCAA AGCTGGCCGC CCGGGCAGCC TCGCTTCCCG CTGGCGATCC GCGCGGCCAT
GTCGTGCTGG GCTCGCTGGT TAATCCTCAG GCCGCCATCA AAATGCAGGA ATTCATCGAC
GATGCCGTCG GCAAGGGCGC AACCCTCGCG GCTGGCGGCA AGGTCACGGG CAGCGTGGTG
GAAGCGACGC TTCTCGACCA TGTCACATCA GGAATGCGCA GTTTCGATGA GGAAAGCTTC
GGCCCGGTCA AGCCGGTCAT CCGGGTCAAG GACGAGGAAG AGGCCATCCG CATCGCCAAT
GACAGCGAAT ACGGCCTGTC CTCGGCGATT TTCAGCCGCG ATATCCAACG CGCCCTGGCG
ATTGCGGCCC GTATCGAAGC CGGCATTTGC CATATCAACG GCCCGACCGT TGCCGATGAG
GCGCAAATGC CGTTTGGCGG TGTGAAAAGC TCCGGTTTCG GTCGGTTCGG CGGCAAGGCG
GCGATCAACG AATTCACCGA CCTGCGCTGG ATCACCATCG AAGATCCGAA CCAGCACTAT
CCGTTCTGA
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| Protein sequence | MHEIQQIIGG KKVGALSGKT FDRIDPFNGE IASRAPASSL DDVKAAVAAA QAAFPAWSRT
GPGERRALLL KAADIMASKA ADFTALMITE TGATGPWAGF NTMLAAGVLR EAASMTSQIQ
GEVIPSDKPG TLSMAVRQAA GVCLGIAPWN APIILGTRAI AMAIACGNSV ILKASEACPG
VHVLIGQVLV EAGLPDGVIN VITNAPEDAA QVVEALVSAP EVRRVNFTGS TKVGRIIGEL
CGRHLKPALL ELGGKAPFLV LEDADIDAAV NAAVFGCYMN MGQICMSTER LIVHEKVADE
FVAKLAARAA SLPAGDPRGH VVLGSLVNPQ AAIKMQEFID DAVGKGATLA AGGKVTGSVV
EATLLDHVTS GMRSFDEESF GPVKPVIRVK DEEEAIRIAN DSEYGLSSAI FSRDIQRALA
IAARIEAGIC HINGPTVADE AQMPFGGVKS SGFGRFGGKA AINEFTDLRW ITIEDPNQHY
PF
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