| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5049 |
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| Symbol | |
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| ID | 7381206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 40001 |
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| End bp | 41539 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643648720 |
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| Product | ABC transporter nucleotide binding/ATPase protein (ribose) |
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| Protein accession | YP_002546957 |
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| Protein GI | 222106166 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATCA GCCAACAGGC GGTGCTGGCC GCGACGGCCA TTACCAAGAC ATTCGGCGCC
CATGTCGCCT TGCACACTAT CGATATTGCC TTCCGCCCGG GTGAAGTCCA TGCATTGCTG
GGCGAAAATG GCGCGGGCAA ATCGACACTG ATCAAGATCC TGACCGGAGC TTATACGCCT
GATGCCGGGA CCGTTCTTGT CGATGGCGCG CCCATGAGTT TTTCCACCCC ACAGCAAGCC
CAGGCAGCCG GCATCGGTAC CGTCTATCAG GAGGTCAATC TCCTGACGAA TATGACGGTG
GCCGATAATC TATTCATTGG TCGCCAGCCG CGTCGTTTCG GCCTGGTCGA TCATCGCACC
ATGGAGCGTG AAGCGCGCCG CATTCTTTCC GGCTACGGAT TGGATATCGA CGTTCGCGCC
GAATTGGCGA CCTTTTCCGT CGCGGTACAG CAGATCATTG CCATCGCCCG GGCCGTCGAA
CTTTCCGGCA AGGTGCTGAT CCTGGATGAG CCGACGGCTA GTCTCGACCG TTCCGAAGTG
TTGAAGCTCT TCGAAATTGT CCGAGGTCTG AAGGCGAGGG GGCTTGCCAT CGTCTTCATC
ACCCATTTCC TGGATCAGGT ATTCGAGCTA TGCGACCACG CCACCGTATT GCGAAACGGA
AAGCTGGTCG GCAGCCAACC GATCGACACC CTCAACCGGA CGACCCTGGT CAGGATGATG
CTGGGCAAGG ACTTGTCCCT GCATCACGAT GCCGTCGCCG GGATTGAGGC GGAGGTTGGC
GAAAGCCTCA TGCAATTTAC CGGCTACGGG CTTGACGGCA AGGTGCAGCC CTTCACGCTT
ACCATTCACA AGGGTGAGGT AATCGGCGTG GCCGGATTGC TCGGGTCCGG GCGCACGGAA
ATGGCCCGGC TGATGTTTGG CATCGACTCC GCCGACAAGG GCGAACTTAC CTTGAATGGA
GCGTCGTTCA AGATCCGCTC GCCGCGTCAG GCTATCGATC TGGGGTTTGG CTTCTGCCCG
GAGGATCGCA AGGCTGACGG TATTTTCGGG GATCTCTCGG TTCGGGAAAA CATTATCATC
GCCATGCAGG CCAAGCTCGG CTGGTTGCGC ACGCTGAGCT ATGACGAGCA GATGGAAATC
GCCGGGCAAT TCATCGAGGC GCTGGACATT CGCACCGCGT CTGCCGAATT GCCGATCAAG
CTTCTGTCTG GCGGCAACCA ACAAAAGGCT ATTCTGGCGC GCTGGCTGGC AACCGATCCT
CGCTTCCTGA TCCTTGATGA GCCGACCCGC GGTATCGATG TCGGAGCCCA TGCGGAAATT
GTCCGAATGA TCAGCCGCCT GCGCGAGGAT GGCCTGGCGC TGATCGTCAT TTCGTCAGAA
CTGGACGAAG TCGTGAGCTA TTCATCACGG ATCGTCGTCA TGCGGGACCG GGCCATGGTG
GCCGAACTGC ACGGCGCTGA TATTGCCCCT GACGTTATCG TTCAGACAAT TGCCGCCCAA
TCCAACACGC CTGCCCAGTC CGAAGGCGCA TTCTCATGA
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| Protein sequence | MTISQQAVLA ATAITKTFGA HVALHTIDIA FRPGEVHALL GENGAGKSTL IKILTGAYTP
DAGTVLVDGA PMSFSTPQQA QAAGIGTVYQ EVNLLTNMTV ADNLFIGRQP RRFGLVDHRT
MEREARRILS GYGLDIDVRA ELATFSVAVQ QIIAIARAVE LSGKVLILDE PTASLDRSEV
LKLFEIVRGL KARGLAIVFI THFLDQVFEL CDHATVLRNG KLVGSQPIDT LNRTTLVRMM
LGKDLSLHHD AVAGIEAEVG ESLMQFTGYG LDGKVQPFTL TIHKGEVIGV AGLLGSGRTE
MARLMFGIDS ADKGELTLNG ASFKIRSPRQ AIDLGFGFCP EDRKADGIFG DLSVRENIII
AMQAKLGWLR TLSYDEQMEI AGQFIEALDI RTASAELPIK LLSGGNQQKA ILARWLATDP
RFLILDEPTR GIDVGAHAEI VRMISRLRED GLALIVISSE LDEVVSYSSR IVVMRDRAMV
AELHGADIAP DVIVQTIAAQ SNTPAQSEGA FS
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