| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5041 |
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| Symbol | |
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| ID | 7381201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 32570 |
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| End bp | 33628 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643648715 |
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| Product | ABC transporter membrane spanning protein (sugar) |
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| Protein accession | YP_002546952 |
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| Protein GI | 222106161 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATCCA TCGAATCCAA CGCGCTGGAG CCGACGCGAG CCGAGCTTTC CGGCATGAGC
ACAGCGCAGA AAATCCAGCG TCTGCTGCCA GTTTACGGTC TCGTCATATT GACCGTGGGG
CTCATCCTGT TGTTTTCCAT TCTCTTGCCG CAGACTTTTC CAACCGTTCT GAACCTACGG
TCAATTATCT CCGACAAAAC GATCATCGCC ATCCTGTCGC TAGCCGCCAT GATCCCCATG
GCAGCGGGAC GAATCGACCT CACCATTGGT TATGGCATCG TGCTGTGGCA CGTGCTGGCC
ATCAGCCTGC AAACCATGTT TGGCCTGCCT TGGCCGGTGG CCGTGCTGAT CGTCATTGCC
CTCGGTGCCT TTACTGGCTT TCTCAATGGC CTTCTGGTCG AAGTCGCCAA GATCGATAGT
TTCATTGCCA CGCTTGGCAC CGGCACAGTG CTTTACGCCA TCGCGCTCTG GCATACCGGT
GGACGTCAGG TGGTCGGCAT GTTGCCGCAA GGCTTTTACA GCCTGAATGG CACCATGGTT
TTCGGCCTGC CGATTACCGG CTTCTATGTT CTGGTGCTGG CAGTGATCAT GTGGCTGGTG
CTCGAATACA CACCGCTTGG CCGCTATGTC TACGCCATCG GCGCCAATCC AAAGGCCGCC
GCGCTGAACG GCATTCCCGT TCGCCGCTTC GTTATCGGTG CCTTTGTCAC GTCAGGCACA
CTCGCCGCAG TGGCGGGCGT GCTGCTCGCC TCAAAGCTGC GGATCGGCCA GGCCAGCGTC
GGATTGGAAT ATCTGCTCCC AGCTCTGGTT GGCGCTTTTC TTGGCTCCAC CACCATCAAG
CCCGGTCGGG TCAATGTCTG GGGTACGATG ATCGGCGTGA TTATTTTGGC CGTCGGCATT
GCGGGCATCC AGCAGATCGG CGGGTCCTTC TATGTCGAGC CATTGTTTAA CGGCGTCACC
CTGCTGGTCG CCATCGGCAT TGCTGGCTAC GCACAACGGC GGCGCAGCCT GTCGGGTCGC
ATGGCGGCAC CCAGCACGCC TCACCCTAAG CAACAATAA
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| Protein sequence | MQSIESNALE PTRAELSGMS TAQKIQRLLP VYGLVILTVG LILLFSILLP QTFPTVLNLR
SIISDKTIIA ILSLAAMIPM AAGRIDLTIG YGIVLWHVLA ISLQTMFGLP WPVAVLIVIA
LGAFTGFLNG LLVEVAKIDS FIATLGTGTV LYAIALWHTG GRQVVGMLPQ GFYSLNGTMV
FGLPITGFYV LVLAVIMWLV LEYTPLGRYV YAIGANPKAA ALNGIPVRRF VIGAFVTSGT
LAAVAGVLLA SKLRIGQASV GLEYLLPALV GAFLGSTTIK PGRVNVWGTM IGVIILAVGI
AGIQQIGGSF YVEPLFNGVT LLVAIGIAGY AQRRRSLSGR MAAPSTPHPK QQ
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