| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5024 |
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| Symbol | glgA |
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| ID | 7381188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 21047 |
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| End bp | 22552 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643648702 |
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| Product | glycogen synthase |
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| Protein accession | YP_002546939 |
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| Protein GI | 222106148 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0297] Glycogen synthase |
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| TIGRFAM ID | [TIGR02095] glycogen/starch synthases, ADP-glucose type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.671586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGAAAG GCAATGTCAT CGATCAGAGT CTGCGATCGC TCTCCGTAAC CTCGGAAATT
TTTCCACTCG TTAAAACTGG TGGTCTCGGT GATGTCACGG GCGCTCTTCC AAAGGCGCTC
GCCAGTTTTG GTGTAGCCAC CCGGACGTTG ATTCCAGGCT ATAGCAATGT CCGCAGATTG
ATCCGGGACC AACCGCCGCT GTTGGTTTTC GAAGACCTTC TTGGCGAATC CGCCGCGCTC
TATGCCGCAA GCATTCATGG TCTCGACCTT TTCATACTCG ATGCGCCGCA ATTGTTCGAC
CGTCCGGGTG GCCCTTATGT GGACGAAAAC GGCCTTGACC ATGCCGACAA TTGGAAGCGA
TTTGCGGTCC TGTCTCTGGC CGCCGCCGAA ATTGCCGCTG GCAGCCTGCC GGGCTGGGTT
CCCGATGTCG TTCACACTCA TGACTGGCAA ACTGCTCTGA CCTCCGTCTA TTTGCGGCAC
ATGGATTGCA CAACGCCTGT GGTCTTGACC ATTCACAATC TGGCCTTCCA GGGCCAGTTC
AATGCTGCCC TGCTGCCCTC CATCGGACTG CCGCCAAGCG TGATGTCGAC GGACTGCATG
GAGTATTATG GGGATATCAG CTACCTGAAG GGTGGTCTGA TGACGTCGAG CATGATCACC
GCCGTCAGCC CGACTTATGC CCGGGAAATC CTTTCGCCAC GCTTTGGCAT GGGGCTTGAG
GGCGTTCTCA GGCAGCGCAA GGACAAGCTG CGCGGTATCG TCAACGGGAT CGATCCGGAA
ATCTGGAACC CGGCTACCGA TCCGCATCTG TTCTCCCGTT TTGATCAGAA AACCATCGGC
CTCAAACGGT TGAACAAGGT GGACTTACAA AACCAGTTTG GCCTGGACAA TGATGATGGT
CCACTGTTTG CCGCCATTAC CCGTATTACA TGGCAAAAAG GCATGGATAT GCTGGCAGAG
GCCGCCAGCG AGATCATTGA TGGCGGCGGT AAGCTGATCG TGCTCGGTCA GGGGGATCGC
GCGCTGGAAC AGGCGCTGAT CGAGACTGCA CAGCGCTTTC CTGGCCGGAT GGCCGTCAAG
ATCGGCTATG ACGAGGAAAC CGCGCATCGC ATTCACGGTG GCGCCGATTC CATCATTCAG
CCATCGCGTT TCGAACCCTG CGGCCTGACC CAGCTTTATG CCCTGCGCTA CGGCTGCGTA
CCGGTGGTGT CACGCACTGG TGGGCTGGCG GAAACCATTA TCGATGCCAA TGACGCAGCA
ATGTCTGCCA AGGCAGCGAC CGGTTTCCAG TTCGACCAGA TCACCACCGA CGGCCTGCGC
CACGCGCTTC GCCGTGCGTT GGACGCCTAT GCCGTACCCC GCCATTGGCG GCGGTTGCAG
CTTCAAGCCA TGCGGGCGCA TTACAGCTGG GAGCGCAGCG CCGAACAATA TGCTGCTCTT
TATAATGCGG TCACCCATCG CCGTACTCCG GCGCGGACCA AGCCGGCTCG GAGCCTGCAT
TCATGA
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| Protein sequence | MQKGNVIDQS LRSLSVTSEI FPLVKTGGLG DVTGALPKAL ASFGVATRTL IPGYSNVRRL
IRDQPPLLVF EDLLGESAAL YAASIHGLDL FILDAPQLFD RPGGPYVDEN GLDHADNWKR
FAVLSLAAAE IAAGSLPGWV PDVVHTHDWQ TALTSVYLRH MDCTTPVVLT IHNLAFQGQF
NAALLPSIGL PPSVMSTDCM EYYGDISYLK GGLMTSSMIT AVSPTYAREI LSPRFGMGLE
GVLRQRKDKL RGIVNGIDPE IWNPATDPHL FSRFDQKTIG LKRLNKVDLQ NQFGLDNDDG
PLFAAITRIT WQKGMDMLAE AASEIIDGGG KLIVLGQGDR ALEQALIETA QRFPGRMAVK
IGYDEETAHR IHGGADSIIQ PSRFEPCGLT QLYALRYGCV PVVSRTGGLA ETIIDANDAA
MSAKAATGFQ FDQITTDGLR HALRRALDAY AVPRHWRRLQ LQAMRAHYSW ERSAEQYAAL
YNAVTHRRTP ARTKPARSLH S
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