| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5017 |
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| Symbol | |
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| ID | 7381182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 14929 |
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| End bp | 15834 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643648696 |
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| Product | S-methyltransferase |
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| Protein accession | YP_002546933 |
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| Protein GI | 222106142 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2040] Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAAAGG TTCGTATTCT CGATGGCGGC ATGAGCCGTG AACTTCTTCG GCTAGGTGCG
GAGTTGAAGC AGCCGGAATG GTCGGCGCTG GCCCTGATCA ATGCTCCTGA CATCGTTCGT
CAGGTGCATG CGGAATTCAT TGCGGCGGGT GCCGATGTTG TGACGACCAA CTCTTATGCA
TTGGTGCCGT TTCATATCGG CGAAGAGCGT TTCCAGAGTG AAGGCCCATC TCTGATTGCT
CTGTCGGGTG AGTTGGCGCG GCAGGCGGCG GATGCCTCAG GTCGAAAGGT GCTTGTAGCC
GGCTCTTTGC CTCCTATCTT CGGTTCCTAT GAGCCGCAGA ATTTCGATCC GTCGACGGTT
GATGCCTATT TGGATGTGCT GGTTGCCAAC CTTGCGCCCT TCGTCGATGT GTGGCTTGGT
GAAACGCTCA GTCTGATTGC CGAAGGCGAA GCCGTTCAAA AAGCGGTTGC CGCAACAGGC
AAGCCCTTCT GGATTTCTTT TACACTTGCT GATGAAGCGG GACAGGATAT TGGCGGCTCA
CCGAAGCTTC GCTCCGGCGA ATTGGTCCAG GATGCCGCGC TTTGGGCGGC GGGCTCTGGC
GCATCGGCGC TGTTGTTTAA TTGCAGCAAG CCGGAAGTGA TGAAGGCGGC GGTGGATGTG
GCGGCAGCGA CATTCAGGCA AAAAGGTGTT TCCCTGGACA TTGGTGTCTA TGCCAATGCT
TTTGAAGGTG AGCAGGGTGA GGCCGCAGCA AATGAGGGAC TGCATGAGAC CCGCGCCGAC
CTGACTGATG ATGCCTATTG CCGCTTTGCC TGCGATTGGG CTGACGCGGG TGCAACGATG
ATTGGCGGTT GCTGCGGCAT TGGCGCGGCG CATATACACC AATTGTCCAA GGCACTTTCC
GCTTAG
|
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| Protein sequence | MTKVRILDGG MSRELLRLGA ELKQPEWSAL ALINAPDIVR QVHAEFIAAG ADVVTTNSYA
LVPFHIGEER FQSEGPSLIA LSGELARQAA DASGRKVLVA GSLPPIFGSY EPQNFDPSTV
DAYLDVLVAN LAPFVDVWLG ETLSLIAEGE AVQKAVAATG KPFWISFTLA DEAGQDIGGS
PKLRSGELVQ DAALWAAGSG ASALLFNCSK PEVMKAAVDV AAATFRQKGV SLDIGVYANA
FEGEQGEAAA NEGLHETRAD LTDDAYCRFA CDWADAGATM IGGCCGIGAA HIHQLSKALS
A
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