| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5015 |
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| Symbol | |
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| ID | 7381180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 13491 |
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| End bp | 14213 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643648694 |
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| Product | ABC transporter membrane spanning protein |
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| Protein accession | YP_002546931 |
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| Protein GI | 222106140 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4215] ABC-type arginine transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGTTT CCCCCGGCAT ACTCGATCTG CTTTCCCCCT ATCCACCTGG ATGGGGAGGA
ACGCTGCTAT GGGGTGCCGG GGCGACGCTT ACCATTTCGG CAGGTGCTTT TCTGATAGGG
TTGGTGATTG GGATTGGCGG CGCTTTGGGC AAGCTGTCTG GCAACCGCCT GCTGCTCGGA
TTGCTCGATG TCTATACGAC AGCGGTGCGC GCAGTGCCGG AACTGATCCT GATTGTCGGT
CTTTATTATG CAGGCACCGA TGGGCTTAAC CGACTATTGC AGGCATTCGG CATGCCAGTA
GTCGAGGTCA ATGGGTTGAT TGCCGCGATT GCGGTTCTCG GTGTCGTCCA GGGTGCTTAC
ATGACCGAAG TGCTCAGGGG AGCTATCCTG GCGATCCCGA TTGGTCAAAG TGAGGCGGCA
AAAGCCTTCG GCATGTCGCC GTTCCTGCGG TTTCACAGGG TCACCTTGCC TGCGCTGCTG
CCCAACGCCC TGCCCGGCCT TGCCAATTTG TGGATGGCTG TCACCAAGGA TAGCGCGCTG
GTTGCCGTCG TCGGCTATCA GGAACTGGCG CTGGCGACCC GGCTGGCGGG GGCGAGCACC
AAGCATTATT TCCTGTTTTT CCTGGCTGCC GCCCTGCTCT ACCTCGCCAT CACTCTTGTT
TCCAACCTGT TCTTCAAGCT GATCGAGCGC CGGGTGCGGC GCGGTCAGCC GCTGCTGTCC
TAG
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| Protein sequence | MAVSPGILDL LSPYPPGWGG TLLWGAGATL TISAGAFLIG LVIGIGGALG KLSGNRLLLG
LLDVYTTAVR AVPELILIVG LYYAGTDGLN RLLQAFGMPV VEVNGLIAAI AVLGVVQGAY
MTEVLRGAIL AIPIGQSEAA KAFGMSPFLR FHRVTLPALL PNALPGLANL WMAVTKDSAL
VAVVGYQELA LATRLAGAST KHYFLFFLAA ALLYLAITLV SNLFFKLIER RVRRGQPLLS
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