Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5010 |
Symbol | |
ID | 7381177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | - |
Start bp | 11250 |
End bp | 11717 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643648691 |
Product | transcriptional regulator AsnC family |
Protein accession | YP_002546928 |
Protein GI | 222106137 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGATT TGGATCGGTT CGATCGCCAG ATCATCGATA TCATTCAGAG AAATTGTCAG CTGAAGGCTG AGATTATTGC CGAACAGATC GGCCTTTCTC TGTCTGCGGT ACAAAGACGT CTGAAACGGC TGCGGGAAGA GGGGATCATC AAAAGTGAAG TGGCGGTGGT GGACCGCAAG ATAACCGGCC ATCCCATGGT GTTTATCGTC GGCATGGAGA TTGAGCGCGA CAATTACGAT GCGCTTGCCC GCTTTCGTAC CTGGTCGGAA CGTCAGGATC ATATTCAGCA GGTTTATTAT GTAACCGGGC AGGTCGATTT GATCGCAATT GTCACTGCCC GGGATGTTGA GCATTACGAC GATATCGCCG CCCTTATCAT GGCTGAAAAC CCGCAAATAC GCCGAATGCA TACCAATGTC GTGCTGCGGG ATATCAAACT CGGGCTATTC GTACCGATGG CGAAATAG
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Protein sequence | MDDLDRFDRQ IIDIIQRNCQ LKAEIIAEQI GLSLSAVQRR LKRLREEGII KSEVAVVDRK ITGHPMVFIV GMEIERDNYD ALARFRTWSE RQDHIQQVYY VTGQVDLIAI VTARDVEHYD DIAALIMAEN PQIRRMHTNV VLRDIKLGLF VPMAK
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