Gene Avi_5010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_5010 
Symbol 
ID7381177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011988 
Strand
Start bp11250 
End bp11717 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content51% 
IMG OID643648691 
Producttranscriptional regulator AsnC family 
Protein accessionYP_002546928 
Protein GI222106137 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGATT TGGATCGGTT CGATCGCCAG ATCATCGATA TCATTCAGAG AAATTGTCAG 
CTGAAGGCTG AGATTATTGC CGAACAGATC GGCCTTTCTC TGTCTGCGGT ACAAAGACGT
CTGAAACGGC TGCGGGAAGA GGGGATCATC AAAAGTGAAG TGGCGGTGGT GGACCGCAAG
ATAACCGGCC ATCCCATGGT GTTTATCGTC GGCATGGAGA TTGAGCGCGA CAATTACGAT
GCGCTTGCCC GCTTTCGTAC CTGGTCGGAA CGTCAGGATC ATATTCAGCA GGTTTATTAT
GTAACCGGGC AGGTCGATTT GATCGCAATT GTCACTGCCC GGGATGTTGA GCATTACGAC
GATATCGCCG CCCTTATCAT GGCTGAAAAC CCGCAAATAC GCCGAATGCA TACCAATGTC
GTGCTGCGGG ATATCAAACT CGGGCTATTC GTACCGATGG CGAAATAG
 
Protein sequence
MDDLDRFDRQ IIDIIQRNCQ LKAEIIAEQI GLSLSAVQRR LKRLREEGII KSEVAVVDRK 
ITGHPMVFIV GMEIERDNYD ALARFRTWSE RQDHIQQVYY VTGQVDLIAI VTARDVEHYD
DIAALIMAEN PQIRRMHTNV VLRDIKLGLF VPMAK