Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5004 |
Symbol | |
ID | 7381172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | - |
Start bp | 6736 |
End bp | 7689 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643648686 |
Product | hypothetical protein |
Protein accession | YP_002546923 |
Protein GI | 222106132 |
COG category | [S] Function unknown |
COG ID | [COG0392] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAAGA AGATTTTGTT GAATGGCATT TTCCTTGCTG CGACAGCAAT AGCCCTCTGG CTGAGCTACC GGGCACTGAG CAAATTCTCC CTCAACGATA TCGAAATGTC ATTGTCTGCC ATCCCTTGGA CAGGTTTTGC TCTGTCATTA TTTTTTTGTG CCGTCTCCTA CCTTTGTCTG ACTGGCTTCG ACTATCTTGG CATCCTCTAT GCTGGTTCTC GTTTGTCCTG GCGAAAAGCC GCGGTCGCGT CTTTTGTCAG CCTCTCTATC GGACATAATG TCGGCTTGGC GGCGCTGTCC AGCGGTGCGG TCCGCTATCG GTATTATCGG CGCTGGGGCC TAAAAAACGA GGAAGTCGCC AAAATCATTC TCTTTTGCGG CGCAACCGTC GGAATCGGCT TGATAGGATT GGCTGGCATT TGCCTTGCCC TGTTTCCGCA GAGTGCGGCC AAGCTCGGCG GCATGGGGAG TTTCGCTGCT CGGCTGATTG GATTTGCCTG TCTGGCTGCA ATTGGCATCT ATCTCGTGGC CTCAGCCTGG CTGCGCGGTG AAATACGAAT ATACAAATGG CGTTTCTCAC TGCCAACCCT GCCTATCGCC CTTGCCCAGG TTGCTGTTGG CATCGCCAAT TTCGCTGCCG TCGCCGCTTG TCTCTTTTGG TTGGCAAGAT CGTCCGCAGG TTTTTTTGAA ACGACAACCG CCTATGTCAT GGCTAACCTC TCGGCGCTGG TTGCCCATGT TCCTGGTGGA CTTGGCGTCA TGGAAGCGAC GATCTCATTC ATCATGGGCA AAGACGCATC GATCGGCGCG CTCATTGCAT TTCGCGTTGT GTATTTTTTC ATTCCGCTGG CAATCGGCAT CCCGGTCTTT GCCATCAGTG AATGGTATTA TTCGCGCCGC GAACGCCGGA ATAATTCCTC GTCAAATGAG ACGGTGAAAG CAGCAACTCT TTGA
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Protein sequence | MQKKILLNGI FLAATAIALW LSYRALSKFS LNDIEMSLSA IPWTGFALSL FFCAVSYLCL TGFDYLGILY AGSRLSWRKA AVASFVSLSI GHNVGLAALS SGAVRYRYYR RWGLKNEEVA KIILFCGATV GIGLIGLAGI CLALFPQSAA KLGGMGSFAA RLIGFACLAA IGIYLVASAW LRGEIRIYKW RFSLPTLPIA LAQVAVGIAN FAAVAACLFW LARSSAGFFE TTTAYVMANL SALVAHVPGG LGVMEATISF IMGKDASIGA LIAFRVVYFF IPLAIGIPVF AISEWYYSRR ERRNNSSSNE TVKAATL
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