Gene Avi_9888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_9888 
Symbol 
ID7380014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011986 
Strand
Start bp66526 
End bp67527 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content58% 
IMG OID643648304 
Producthypothetical protein 
Protein accessionYP_002546541 
Protein GI222102400 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTCATA GCTGGCTTGA TGGTTGGGAC GAGCGGCGCG CGCAGCGTGG TGACGAGGCC 
AAGAAGACAA CGCCTTTCGT GATCGACGCC GATCGCGCCT TTCCCGGTGC GCAGAGTACC
GCGTCTCTGG AAGAATTTTG TCTGCTTGCC GGCAAAGCCG CTTCCGATCC GGGTTTCTTC
GAGCGACCGA GCGGGAGCGT TGAAGGATTT GAAAGAAAGG ACGGATGGCT CAAGTTCCCG
TCCGATATCG CGACGGACGT TGACGAGAAC AATACCGTCT GGGCCAAAAT CACGGAAAGC
GCGTCATGCA AAAAGGCACT GGTGATTTTC CACCACTGGA ATGCCGACGC CCGGAATGCC
CAGATTGCGA CATTGTTTTC GAGGCGCGGC ATCACCGTGA TCGAGATCGC GATGCCCTAT
CATTTCGAAC GCAGCCGTCC CGGCTCGCTG TATGCCGACT ACATCCTCAG TGCCAATCTC
GGGCGAACGC TCCAGTCCAT GAGGCAAGCG GTTTGCGATG GCCGGAAAGT CATTGGCTGG
CTGAAAAGCG AAGGCTATCG CGAGATTTCG GTTCTCGGCA TGAGCCTGGG CTCTTGGGTC
GCAGGATTGA TCACGGCGCA CGAGCCCGCC GTGTCGAAAG CCTCGCTGTT TCTGACAGCC
GGTAGCCTCG CTGACATGGT TTGGACAGGG CGCGCAACAC GATCCATACA CGACAGCCTT
GCGCCCCATA TCGAGCTGGA CGACCTCAGA CGTGCGTGGG GACCGCTCAA CCTCGAGAAC
TACGCGCAAA ATTTGGCGCG ACCCGATTTA AGGCTTCACA TTGTCCTTGC GAAACGAGAC
ACGGTCGTTT TGCCCGGTCT ATCGTCCCGA TTTATGCAGA AGCTCAAGAA TGTCGGCGCT
TCGCCTCACA TCCTCGAACT GAACTGCGGG CATTATTCGC TTGGTATTCC GCCTTACATC
CTGCGAGCTG GCACGAGCTT GAACAGCTTC CTGTCGCGCT GA
 
Protein sequence
MFHSWLDGWD ERRAQRGDEA KKTTPFVIDA DRAFPGAQST ASLEEFCLLA GKAASDPGFF 
ERPSGSVEGF ERKDGWLKFP SDIATDVDEN NTVWAKITES ASCKKALVIF HHWNADARNA
QIATLFSRRG ITVIEIAMPY HFERSRPGSL YADYILSANL GRTLQSMRQA VCDGRKVIGW
LKSEGYREIS VLGMSLGSWV AGLITAHEPA VSKASLFLTA GSLADMVWTG RATRSIHDSL
APHIELDDLR RAWGPLNLEN YAQNLARPDL RLHIVLAKRD TVVLPGLSSR FMQKLKNVGA
SPHILELNCG HYSLGIPPYI LRAGTSLNSF LSR