Gene Avi_9870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_9870 
Symbol 
ID7380002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011986 
Strand+ 
Start bp57117 
End bp57572 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content61% 
IMG OID643648292 
Producthypothetical protein 
Protein accessionYP_002546529 
Protein GI222102388 
COG category[R] General function prediction only 
COG ID[COG3019] Predicted metal-binding protein 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAA GAGAATTCCT CTGGACACTG GCAGCCATCG GAGCATTGCC CGTTGTCGGA 
AAGGCGCGGG CAGCCGGCGA AAGCATGGTT GTCTATAAGG ACCCGAACTG CGGCTGCTGC 
CGTGCCTGGG CCGACGCGAT GACGAAAGCC GGGTTTGCCG TGAAGGCTGA AGACGTGGAC 
GACATCAATG TGGTGAAGGA CCGCTTTAAA GTCCCTGGCG ATCTGCGGGG CTGCCACACC 
GCAGTCGTTG CCGGATACTA CTTGGAGGGC CACGTTCCGC TGGAGGCGGT GACGAGACTG 
CTCGCGGAGA AGCCTGATAT CGCGGGTCTC GCCGTACCGG GCATGCCTTT AGGGTCGTTG 
GGAATGGGGG GCAGCCCCAG CGCGTCGTAC GACGTCATGT CCGTTGGGAA GGACGGCGCT 
AGCACGCTTT ACCAGGCGGT CAGGTCAAAA GGCTAG
 
Protein sequence
MKRREFLWTL AAIGALPVVG KARAAGESMV VYKDPNCGCC RAWADAMTKA GFAVKAEDVD 
DINVVKDRFK VPGDLRGCHT AVVAGYYLEG HVPLEAVTRL LAEKPDIAGL AVPGMPLGSL 
GMGGSPSASY DVMSVGKDGA STLYQAVRSK G