| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9868 |
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| Symbol | |
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| ID | 7380000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011986 |
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| Strand | + |
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| Start bp | 52517 |
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| End bp | 53944 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643648290 |
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| Product | Membrane-fusion protein |
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| Protein accession | YP_002546527 |
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| Protein GI | 222102386 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACATCC CGCGCATCAT TGCCACGCTC TCCCTCGCCG CGATCGTCGG CGGGGGAGGC
TATTGGGCCG GGAAGTACGA TGTCGGTGCA TTTTTTCAGG GGGGCGTCAA AGGGACCGGG
ATGGCCGCCG AGGCGGAACC GCGACGCGAA GGAACGGGAG CGGTGATCTA TTACCGCCAT
CCGGACGGGT TGGCCGAATA CTCCGCCACG CCAAAGAACA CCGATGACGG GCGGCTATTC
GTTCCTGTTC GAGCAAGCGA GGACATCAGC CTCGGCCCAA GCGGAGCCGT CGCGCCGTCA
CCCGATACGG CATCCGTCTC ACTCGAGCGT AAAATCTTGT ACTACCGCAA CCCCATGGGG
CTTCCCGACA CGTCCAAGGT TCCGAAGAAG GATTCAATGG GGATGGACTA TCTTCCCGTC
TATGACGGCG ACGTCAGCGA CAGTTCAACG GTGAAGGTCC CTCTCGGTAA ACTCCAGCGG
ACGGGGGTGA GGACTGCGCT GGCCGAAGTG ACAACCGTCA GCCGGAAAAT CCGAGTCCCC
GGGACAGTCA CATTGGACGA GCGTAGGGTG AGCATCATTT CGATGCGGGC AGATGCCTTC
GTGGAGGACG TGGCGAATGT CACGACCGGC GATGCGATCA CGAAGGGCGA AAACCTCTTT
CAGTTCTATT CAAAGGAGAT CGCCACCGCC GGAGCGGAAT ACGCAGCCGA GATGCGCAAC
GGGGCAAAGT CCAACCCTGA CTCCGGGGCG GCGCTTCGTT TGAAAAATCT GGGCGTGCCC
ACGGCAACGA TCGGCAGCAT CGCGAGCGAG AGGAAAGTGC CGCAAAGTAT CGCTTACACG
TCGCCGCGTG ACGGCGTCGT GCTCGAGCGT ATGGCTGTGA GCGGCATGAT GGCCGAGGCT
GGCGACATTC TTTTTCGCAT CGCAGACGTG TCCAGGGTCT GGGTAATCGC CGACGTGCCG
GAATATGAGC TAAGCGCGGT CCGCAAGGGA GCCGTCGTTT CCGTGATCGT CCGCAATCTG
CCCGGTACGA CATTCAAGGG GACGGTCGAT CTCATCTATC CCGAGGTCCA GATGCAGACC
CGGACGACGA AGGTCAGGAT CGAGCTTCCG AACCCTAGCG GCCAACTGAT GTCCAACATG
TATGCCGAGG TCGAGATCGA AGCCGGATCT GGAAACCCAG TCGTCGCCGT TCCCAACAGT
TCGGTCATTG ACACGGGCGA CCGCCAGCTC GTCTTCATCG ATAAGGGCGA GGGCAGGTTC
GAACCGATGA ACGTCGCGCT GGGTGTCCGA GGTGAGGACA TGACCGAGAT CACCAAAGGG
ATCGCCGCTG GCGACCGTGT GGTCGTGTCG GCCAACTTCC TGCTGGACGC CGAAAGCAAC
CTGAACGCCG CGTTGAGCGC GCTGACAGCG GATGAGGTGA AACCATGA
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| Protein sequence | MNIPRIIATL SLAAIVGGGG YWAGKYDVGA FFQGGVKGTG MAAEAEPRRE GTGAVIYYRH
PDGLAEYSAT PKNTDDGRLF VPVRASEDIS LGPSGAVAPS PDTASVSLER KILYYRNPMG
LPDTSKVPKK DSMGMDYLPV YDGDVSDSST VKVPLGKLQR TGVRTALAEV TTVSRKIRVP
GTVTLDERRV SIISMRADAF VEDVANVTTG DAITKGENLF QFYSKEIATA GAEYAAEMRN
GAKSNPDSGA ALRLKNLGVP TATIGSIASE RKVPQSIAYT SPRDGVVLER MAVSGMMAEA
GDILFRIADV SRVWVIADVP EYELSAVRKG AVVSVIVRNL PGTTFKGTVD LIYPEVQMQT
RTTKVRIELP NPSGQLMSNM YAEVEIEAGS GNPVVAVPNS SVIDTGDRQL VFIDKGEGRF
EPMNVALGVR GEDMTEITKG IAAGDRVVVS ANFLLDAESN LNAALSALTA DEVKP
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