| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9851 |
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| Symbol | copB |
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| ID | 7379986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011986 |
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| Strand | - |
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| Start bp | 40981 |
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| End bp | 42441 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643648276 |
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| Product | copper tolerance protein |
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| Protein accession | YP_002546513 |
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| Protein GI | 222102372 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTTT TCACTTTTAA ATGCGCTGCG ACTGTTGCAC TGCCGCTCAT TCTCGGTGGA
TGCGTATCAT CGACGGAATA CTCTGCGACA ACCGCCGGGT TTTCTAACGT TTCAAACAAA
ACGGCCGAGG CGACGGGAAA GGACACCGTT TGGGTGCAGA ATCGCCAGGA CGCGCAGTTG
GTCTCAGGCC GGGTAAAGAC GCTCCTCACC AAAAAGACCG TCGACGTCGA GACGGCGGTG
CAGATAGCCC TTCTCAACAA CAAGGGTCTG CAGGCGGCCT ACGCCGATCT TGGAGACTCT
TCGGCGGATG CATGGCAGTC CACGATGCTC GTAAACCCGA CGGTCGGTAT CGGCCTGACG
GGGATCGGCA CACCCGGTCT CGAAGCTTAT AGAGCCATCG AAGGTGTGAT CGCCACCAAC
ATCCTCGCAC TCGCCACCCA CAAGCGGAAC GTCGAAATCG CCGATGCCGG GTTCCGCAAG
GCACAGCTCG CTGCTGCCGT TCGGACACTT CAGTTGGCGG CGGAGACCCG TCGCGCATGG
ATAACTGCCG TTGCCTCCTG GGAAACGGTC GCCCAGCTCA GCCAGGCACA AGCCGCCGCC
GACGCAGCGT CGGAACTCGC GAAGAAACTT GGCGAAACAG GCTCCATGAC GAAGGGAGGC
CAGGCCCGCG AGCATGTCTT TTATGCTGAA CTGGCAGGCC AGACCGCCAA GGCAAGGCTT
GAAGCCCGTC TTGCAAAGGA AGAGCTGACA CGTCTCATGG GACTTTGGGG CTCGGACATC
GACTATCAGA TTCCCAATCG ACTGCCGCAG CTTCCCAAGA GTCTTGTCAA GCGAGACCTT
ATCGAAGCCG AGGCTTTGCA ACGTCGGGTG GACCTGCAGA TGGCCAAGCT CGACCTCAAT
ACCACCGCAA AATCCTACAA GCTGACGGAA GCGACACGCT ACGTCACCGA TCTCGAAATC
CTGTCCGGGT TCGAGACGGA ACGCGAATTG GAGGACGGTG AAAAGAAAAA GGACACGACC
GGCAATGTCG AACTGGAATT CGTGATTCCA ATCTTCGACA GCGGCAAAGC GCGTATGAGG
AAGGGCGAAC TGGCCTACAT GCGGACGGCA AACCTGCTCG CGGAAAAGGC AGTCAACGTC
CGGTCTGAAG CAAGGTCCGC CTATCAGGCC TATCGGTCGA ACTACGACAT CGCCAGGCAC
TACCGCAACA GTGTCGTGCC GTTGCGCAGC AAGATCGAAG AGGAATCCCT CCTCACCTAC
AATGGCATGA TTTCCAACAC GTTCGAACTG CTCGCCGACA GCCGGGAAAA GGTCAATTCG
GTCCTCCTCG CCGTCAATGC AAAACGCGAT TTCTGGTTGG CCGAAGCCAA TCTCGCACCT
GCCATCTATG GCGGCGGCGC GGGTGCAGCA GGTGGTGAGA CCGAGGTTGC AGCGGCCGCC
GAAAGCGGCG GCGGTCACTG A
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| Protein sequence | MSLFTFKCAA TVALPLILGG CVSSTEYSAT TAGFSNVSNK TAEATGKDTV WVQNRQDAQL
VSGRVKTLLT KKTVDVETAV QIALLNNKGL QAAYADLGDS SADAWQSTML VNPTVGIGLT
GIGTPGLEAY RAIEGVIATN ILALATHKRN VEIADAGFRK AQLAAAVRTL QLAAETRRAW
ITAVASWETV AQLSQAQAAA DAASELAKKL GETGSMTKGG QAREHVFYAE LAGQTAKARL
EARLAKEELT RLMGLWGSDI DYQIPNRLPQ LPKSLVKRDL IEAEALQRRV DLQMAKLDLN
TTAKSYKLTE ATRYVTDLEI LSGFETEREL EDGEKKKDTT GNVELEFVIP IFDSGKARMR
KGELAYMRTA NLLAEKAVNV RSEARSAYQA YRSNYDIARH YRNSVVPLRS KIEEESLLTY
NGMISNTFEL LADSREKVNS VLLAVNAKRD FWLAEANLAP AIYGGGAGAA GGETEVAAAA
ESGGGH
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