Gene Avi_9838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_9838 
Symboltnp 
ID7379977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011986 
Strand
Start bp32369 
End bp33274 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content60% 
IMG OID643648266 
Producttransposase 
Protein accessionYP_002546503 
Protein GI222102362 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTCCT TCATTGACGA ACACCGCTCG GTGCTCGGGG TCGAGCCGAT CTGCAGGCTG 
CTGCCGATTG CCCCGTCCAC CTATTATGAG GTCGTCGCCA AGCGCACGGA CGTGGGTCGC
CTATCGGCCC GCGAACGGAA TGATATTGCC ATGAAAGTCG AGATACGCCG GGTGTTCAAC
GAGAACTTCC AGGTCTATGG CGTGCGGAAA GTGTGGCGAC AGTTGCAGCG AGAAGGCTTC
GATATTGCTC GCTGCACCGT CGCAAGGCTC ATGAGAATGA TGGGTCTTCA AGGCATCATT
CGTGGCAAGC CCATCAAAAC CACCGTATCG GACAAGTCTG CCCCGTGTCC GCTCGACCGC
GTCAACCGCC ACTTCAAGGC TCCCGCGCCG AACATGCTCT GGCTTTCCGA TTTCACCTAT
GTCGCGACCT GGCAGGGCTT CGTCTACGTG GCCTTTGTAA TCGATGCCTT CGCCCGCCGT
ATCGTTGGCT GGCGGGCCAG TCGAACAGCG CACGCGGGAT TCGTCCTCGA TGCTCTCGAC
CAGGCACTCC ATGATCGGCG GCCCGTCAAA CGTGGCGGGC TGGTTCATCA TTCCGACCGC
GGCTCGCAAT ACGTGTCCAT TCGCTATTCC GAACGACTGG CCGAGGCGGG CATCGACCCG
TCTGTCGGAA GCGTTGGCGA TAGTTACGAC AATGCTCTCG CCGAAACGAT CAACGGTCTT
TACAAGGCCG AGGTCATCCA TCGGCGAGGA CCATGGCGCA ACTTCGAAGC TGTGGAGTTC
GCCACGCTCG AATGGGTCGA CTGGTTCAAC CACCGTCGCC TTCTGGAGCC CATCGGGAAT
ATCCCGCCAG CCGAGGCCGA AGAACGATAC TACGCCATAC TGGACGCGCC AGCCATGGCC
GCATAA
 
Protein sequence
MISFIDEHRS VLGVEPICRL LPIAPSTYYE VVAKRTDVGR LSARERNDIA MKVEIRRVFN 
ENFQVYGVRK VWRQLQREGF DIARCTVARL MRMMGLQGII RGKPIKTTVS DKSAPCPLDR
VNRHFKAPAP NMLWLSDFTY VATWQGFVYV AFVIDAFARR IVGWRASRTA HAGFVLDALD
QALHDRRPVK RGGLVHHSDR GSQYVSIRYS ERLAEAGIDP SVGSVGDSYD NALAETINGL
YKAEVIHRRG PWRNFEAVEF ATLEWVDWFN HRRLLEPIGN IPPAEAEERY YAILDAPAMA
A