| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9835 |
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| Symbol | tnp |
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| ID | 7379974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011986 |
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| Strand | + |
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| Start bp | 29463 |
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| End bp | 31016 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643648263 |
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| Product | transposase |
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| Protein accession | YP_002546500 |
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| Protein GI | 222102359 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4584] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAGAC GGAAGCAAGC GAGACATACT GACGTGAAGG ATATCCGATC GATCCTGCGG
CTGACGTTCG AGCAGCGATT GTCGATACGT GCCGTTTCCG AGCGGCTGAA GATGAGCAAG
ACGTCGGTTT CGACGTATCT TCTGCGGGCT CAAGAAGCCG GCCTTGGGGT CTGGCCACTT
CCACCGGGCC TGGACGAGGA CGACGTTCTC CAGCAACGGC TCTTCCGGCG GATGGGACGA
CCTCCACGCG ATACCGTTGA GCCGAACTGG CCGAAGATGG CCAGCGAATT GAAGCGCAAG
GGTGTCACGC TCCATTTGCT TTGGCAGGAA TACCGGGAAG CCCATCCGGA TGGCTATGGC
TATACATGGT TCTGCGGCCG GTTTGCCGAT CACGAAAGCC GAGCCAAGCC CACCTACCGC
AGCCGTCACA TTGCTGGTGT TGCGATGGAA TGCGATTATG CCGGCCATAC AATCCCGATC
ATCGATCCAT CGAGCGGCGA GATCCGCTCG GCACAGATCT ATGTTGCGGT GCTGAGCGCA
TCCCAACTGA CGTTTGCATA TGCCAGCTTC AGCCAAAAGC TGCCGGATTG GATCGAGGCG
AACCAGCGGG CCTTTAGTTA CTTCGGCGGC GTGACGAAGA CGACGATCTG CGACAATCTG
AAGTCTGCGG TGGCCAAGGC GCTATGGTTC GAACCGACAT TGAATACGAC GTTTGCCGCT
TTCGCCGAAC ACTACGACAC AACCGTGGTT CCGGCCCGCC CACGGCATCC TCGGGACAAG
CCGTCCGCGG AAGGGACGGT TTTAATCGTT GAGAGATGGG TCCTGGCCAG ACTTCGAAAC
GAACGGTTCT TCAGTCTCGT TGACCTCAAT ATCCGCATCA GCGCTTTGAT CGAAGACCTC
AATTCCCGGA CGATGCGGCG ATATGGCAAG TCCCGGCGCG CACTATTCAA TGAAGTCGAG
CGCGCTCAGT TGAAGCCACT GCCTGCAACG CCGTTCGAGT ACGCGGAATG GAAGACGGCA
AAAGTCCATC CCGACTACCA TGTCGAGGTC GACAAGACCT TCTATTCCGT ACCGCATGGG
CTGATCGGAA AGCGCGTCGA TGTCAGGCTG ACATATCGGG CAGTTGAGAT CTTCCTTGAT
CATAAACGGG TCGCAAGCCA CATCCGAAGC TCGCAGCGCT CGGGCCATGT CACCGTCAAT
GAACATATGC CCAAGGCGCA TCAGCGCTAC GCAAACACGA CGCCTCACAC ATTGCGCAGG
GAAGCAGCGA AGGTGGGGAT CAACACGGCA ACGTTTATCG AACGTCTGCT CAGCGACCGC
CCACATCCCG AACAGGGCTA CCGATCCGCT CAAGGCGTTC TCTCCCTGGG GCGCCGATAC
CAATCCGATC GTCTGGAGCT GGCTTGCGAG CGGGCGCTGG TGATCAACGC GCTGAGCTAT
TCGTCTGTCG CCAATATTCT CAGATCTGGT CTCGATCAGG CTCCGGTCAT GACCGAGGCC
GTGAAGCCGG CGCCGCCGCA CGGCAATATC CGCGGCAAAA CCTACTATCA ATAA
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| Protein sequence | MRRRKQARHT DVKDIRSILR LTFEQRLSIR AVSERLKMSK TSVSTYLLRA QEAGLGVWPL
PPGLDEDDVL QQRLFRRMGR PPRDTVEPNW PKMASELKRK GVTLHLLWQE YREAHPDGYG
YTWFCGRFAD HESRAKPTYR SRHIAGVAME CDYAGHTIPI IDPSSGEIRS AQIYVAVLSA
SQLTFAYASF SQKLPDWIEA NQRAFSYFGG VTKTTICDNL KSAVAKALWF EPTLNTTFAA
FAEHYDTTVV PARPRHPRDK PSAEGTVLIV ERWVLARLRN ERFFSLVDLN IRISALIEDL
NSRTMRRYGK SRRALFNEVE RAQLKPLPAT PFEYAEWKTA KVHPDYHVEV DKTFYSVPHG
LIGKRVDVRL TYRAVEIFLD HKRVASHIRS SQRSGHVTVN EHMPKAHQRY ANTTPHTLRR
EAAKVGINTA TFIERLLSDR PHPEQGYRSA QGVLSLGRRY QSDRLELACE RALVINALSY
SSVANILRSG LDQAPVMTEA VKPAPPHGNI RGKTYYQ
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